Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:2928000 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29281302928438309hypothetical proteinBLASTP
292878029301261347transport of long-chain fatty acidsQuickGO ontologyBLASTP
293049129315221032hypothetical proteinBLASTP
29319172932672756lipoprotein VacJ familyQuickGO ontologyBLASTP
29329662933898933hypothetical proteinBLASTP
293417429353671194prophage integraseQuickGO ontologyBLASTP
293554229366781137prophage DNA injection proteinQuickGO ontologyBLASTP
29366882937368681phage DNA transfer proteinQuickGO ontologyBLASTP
29373552937822468hypothetical proteinBLASTP
29378222938391570hypothetical proteinBLASTP
29383742939069696hypothetical proteinBLASTP
293973929411511413hypothetical proteinBLASTP
29413382941514177hypothetical proteinBLASTP
29418172942443627Resolvase domain proteinQuickGO ontologyBLASTP
294304129442881248OligosaccharideH symporterQuickGO ontologyBLASTP
29443602945274915fructokinaseQuickGO ontologyBLASTP
294549029469231434Sucrose-6-phosphate hydrolaseQuickGO ontologyBLASTP
294693129479891059sugar binding transcriptional regulator LacI familyQuickGO ontologyBLASTP
29481692948387219hypothetical proteinBLASTP
294850729495351029D-serine ammonia-lyaseQuickGO ontologyBLASTP
294984129513791539multidrug resistance protein YQuickGO ontologyBLASTP
295137929525421164Drug resistance MFS transporter membrane fusion protein MFP subunit EmrKQuickGO ontologyBLASTP
29529582953572615Positive transcription regulator evgAQuickGO ontologyBLASTP
295357729571703594hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP
295722629584101185hypothetical proteinBLASTP
29584452959389945hypothetical proteinBLASTP
295945929611531695thiamine pyrophosphate-dependent enzymeQuickGO ontologyBLASTP
296120729624571251formyl-coenzyme A transferaseQuickGO ontologyBLASTP
29629702963605636hypothetical proteinBLASTP
29639492964176228hypothetical proteinBLASTP
29642532964495243hypothetical proteinBLASTP
29648482965768921hypothetical proteinBLASTP
296626029674981239aminotransferase classes I and IIQuickGO ontologyBLASTP
296787529695721698hypothetical proteinBLASTP
29695872970321735hypothetical proteinBLASTP
29703342971191858AraC family transcriptional regulatorQuickGO ontologyBLASTP