Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1599526 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15987511599542792Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
15995261600515990CheW proteinQuickGO ontologyBLASTP
16005231601017495CheW proteinQuickGO ontologyBLASTP
16011491601556408hypothetical proteinBLASTP
16015871601943357FlhB domain proteinQuickGO ontologyBLASTP
160194316040962154hypothetical proteinBLASTP
16042841605066783VacJ family lipoproteinQuickGO ontologyBLASTP
160519716063001104response regulator receiver proteinQuickGO ontologyBLASTP
160640616078751470amino acidpeptide transporterQuickGO ontologyBLASTP
16084531608980528NusG antitermination factorQuickGO ontologyBLASTP
160975216125142763polysaccharide export proteinQuickGO ontologyBLASTP
16126001613574975lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
161379216148891098dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
16148891615764876glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
16157741616640867dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
16166431617188546dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
161718816182461059glycosyl transferase group 1QuickGO ontologyBLASTP
161827416197821509polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
16199231620663741short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
162069516224371743thiamine pyrophosphate enzyme TPP binding domain proteinQuickGO ontologyBLASTP
162244016235701131hypothetical proteinBLASTP
162356716247211155glycosyl transferase group 1QuickGO ontologyBLASTP
16247331625311579transferase hexapeptide repeat containing proteinQuickGO ontologyBLASTP
162528916264071119tetratricopeptide TPR_2QuickGO ontologyBLASTP
16264001627377978hypothetical protein
16273771628186810glycosyl transferase family 2QuickGO ontologyBLASTP
162967916307461068undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
163090016319431044undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferaseQuickGO ontologyBLASTP
16319721632892921UTP-glucose-1-phosphate uridylyltransferase GalUQuickGO ontologyBLASTP
16340841634827744PHP C-terminal domain proteinQuickGO ontologyBLASTP
16351111635779669hypothetical protein
16361621637067906sulfate adenylyltransferase small subunitQuickGO ontologyBLASTP
163708516385421458sulfate adenylyltransferase large subunitQuickGO ontologyBLASTP
163870216404291728TrkA-C domain proteinQuickGO ontologyBLASTP
16404921641121630Adenylyl-sulfate kinaseQuickGO ontologyBLASTP
164129916427651467hypothetical proteinBLASTP
16431511643945795325-bisphosphate nucleotidaseQuickGO ontologyBLASTP
16439741644864891ROK family proteinQuickGO ontologyBLASTP