Pre_GI: BLASTN Hits

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Query: NC_016830:4639388 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4639388, End: 4663850, Length: 24463

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome01629BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome01469BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome0908BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome0864BLASTN svgBLASTP svg
NC_010501:18688881868888190527536388Pseudomonas putida W619, complete genome0856BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome0690BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome9e-136492BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome4e-113416BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome3e-95357BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-83317BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-83317BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-74287BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome3e-74287BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome4e-61244BLASTN svgBLASTP svg
NC_014500:1646854*1646854167518028327Dickeya dadantii 3937 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_010002:33577523357752338379626045Delftia acidovorans SPH-1, complete genome6e-29137BLASTN svgBLASTP svg
NC_015138:765497*76549779476529269Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-26127BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome6e-23117BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-19105BLASTN svgBLASTP svg
NC_009480:739395*73939576050021106Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete8e-19103BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007952:14160001416000143886822869Burkholderia xenovorans LB400 chromosome 2, complete sequence8e-1693.7BLASTN svgBLASTP svg
NC_003296:14199921419992144318623195Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-1591.7BLASTN svgBLASTP svg
NC_010725:3917369*3917369396168844320Methylobacterium populi BJ001, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013851:26108472610847263605825212Allochromatium vinosum DSM 180 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008542:1727000*1727000174809921100Burkholderia cenocepacia HI2424 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_011894:62596496259649628391924271Methylobacterium nodulans ORS 2060, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-0971.9BLASTN svgBLASTP svg
NC_003295:659837*65983768202922193Ralstonia solanacearum GMI1000, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007511:10940501094050112124627197Burkholderia sp. 383 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_015510:22096632209663223284123179Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_020211:16210001621000164274521746Serratia marcescens WW4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009921:54006635400663541981119149Frankia sp. EAN1pec, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
CP002516:4081484*4081484410409522612Escherichia coli KO11, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008687:30245030245032509922650Paracoccus denitrificans PD1222 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_015690:1818333*18183331947673129341Paenibacillus mucilaginosus KNP414 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014258:35584535584537624420400Pantoea vagans C9-1 plasmid pPag3, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006351:27597082759708280620746500Burkholderia pseudomallei K96243 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg