Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:1868888 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
186888818701261239response regulator receiver modulated serine phosphataseQuickGO ontologyBLASTP
18701231870605483anti-sigma-factor antagonistQuickGO ontologyBLASTP
187065818725171860hypothetical proteinBLASTP
18726611873587927transaldolaseQuickGO ontologyBLASTP
18738201874785966TIM-barrel protein yjbN familyQuickGO ontologyBLASTP
18755871876513927Alphabeta hydrolase fold-3 domain proteinQuickGO ontologyBLASTP
18766351877573939transcriptional regulator LysR familyQuickGO ontologyBLASTP
18782281878998771short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
187906218801651104iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
18802121881174963hypothetical proteinBLASTP
188133418823651032transcriptional regulator LacI familyQuickGO ontologyBLASTP
18823621883309948hypothetical proteinBLASTP
188330618843101005luciferase family proteinQuickGO ontologyBLASTP
18847261885199474cupin 2 conserved barrel domain proteinQuickGO ontologyBLASTP
18852821886208927transcriptional regulator LysR familyQuickGO ontologyBLASTP
188660018879881389major facilitator superfamily MFS_1QuickGO ontologyBLASTP
188807918892721194alphabeta hydrolase foldQuickGO ontologyBLASTP
188959518905579633-hydroxyacyl-CoA dehydrogenase NAD-bindingQuickGO ontologyBLASTP
18906081891534927protein of unknown function DUF849QuickGO ontologyBLASTP
189164518930151371major facilitator superfamily MFS_1QuickGO ontologyBLASTP
189301218945381527Altronate dehydrataseQuickGO ontologyBLASTP
18946021895321720transcriptional regulator GntR familyQuickGO ontologyBLASTP
18954891896277789short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
18974471897929483NADH dehydrogenase ubiquinone 24 kDa subunitQuickGO ontologyBLASTP
189792318994821560NADH dehydrogenase quinoneQuickGO ontologyBLASTP
189947919023582880formate dehydrogenase alpha subunitQuickGO ontologyBLASTP
19023551902558204formate dehydrogenase delta subunitQuickGO ontologyBLASTP
190275219045691818ABC transporter domain proteinQuickGO ontologyBLASTP
19045861905275690protein of unknown function DUF159QuickGO ontologyBLASTP