Pre_GI: BLASTP Hits

Some Help

Query: NC_014328:4471995:4497934 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 4497934, End: 4499340, Length: 1407

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:163000:1656221656221670251404Clostridium botulinum BKT015925 chromosome, complete genomecell cycle protein MesJ2e-155549
NC_008593:153014:1555461555461569401395Clostridium novyi NT, complete genomeCell cycle protein MesJ, putative7e-154544
NC_004557:162670:1626701626701640731404Clostridium tetani E88, complete genomecell cycle protein mesJ4e-137488
NC_009699:3839575:3872747387274738741531407Clostridium botulinum F str. Langeland chromosome, complete genometRNA(Ile)-lysidine synthetase4e-121435
NC_009698:3609881:3643059364305936444651407Clostridium botulinum A str. Hall chromosome, complete genometRNA(Ile)-lysidine synthetase1e-120433
NC_009495:3735703:3769960376996037713661407Clostridium botulinum A str. ATCC 3502 chromosome, complete genometRNA(Ile)-lysidine synthetase1e-120433
NC_008262:2649289:2693810269381026952191410Clostridium perfringens SM101, complete genometRNA(Ile)-lysidine synthetase5e-116418
NC_010723:173280:1812001812001826061407Clostridium botulinum E3 str. Alaska E43, complete genometRNA(Ile)-lysidine synthase6e-113407
NC_020291:117983:1330981330981345041407Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA(Ile)-lysidine synthase TilS1e-110400
NC_018664:2459994:2484668248466824860501383Clostridium acidurici 9a chromosome, complete genometRNA(Ile)-lysidine synthase3e-97355
NC_003869:2267627:2283780228378022851831404Thermoanaerobacter tengcongensis MB4, complete genomepredicted ATPase of the PP-loop superfamily implicated in cell cycle control1e-96354
NC_009012:2661795:2683143268314326845551413Clostridium thermocellum ATCC 27405, complete genometRNA(Ile)-lysidine synthetase9e-96350
NC_013316:4018451:4040068404006840414561389Clostridium difficile R20291, complete genomeputative ATPase5e-94345
NC_009089:4140764:4161747416174741631351389Clostridium difficile 630, complete genomeputative ATPase5e-94345
NC_010320:819326:8235828235828249581377Thermoanaerobacter sp. X514 chromosome, complete genometRNA(Ile)-lysidine synthetase4e-90332
NC_015958:2361551:2377798237779823791741377Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometRNA(Ile)-lysidine synthase1e-88327
NC_015275:3680323:3680323368032336816961374Clostridium lentocellum DSM 5427 chromosome, complete genometRNA(Ile)-lysidine synthetase3e-71269
NC_014483:39729:5869858698601461449Paenibacillus polymyxa E681 chromosome, complete genometRNA(Ile)-lysidine synthase2e-61237
NC_016641:1639356:1657391165739116588391449Paenibacillus terrae HPL-003 chromosome, complete genometRNA(Ile)-lysidine synthase1e-59231
NC_017208:64500:6731767317686091293Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecell cycle protein MesJ1e-51204
NC_015703:4933430:4986515498651549878341320Runella slithyformis DSM 19594 chromosome, complete genometRNA(Ile)-lysidine synthase1e-49197
NC_018704:81733:8173381733831361404Amphibacillus xylanus NBRC 15112, complete genometRNA(Ile)-lysidine synthase1e-45184
NC_007498:1148249:1168260116826011696361377Pelobacter carbinolicus DSM 2380, complete genomecell cycle protein6e-45182
NC_011565:1:5397539767401344Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,tRNA(Ile)-lysidine synthase5e-45182
NC_013037:6281164:6286374628637462877081335Dyadobacter fermentans DSM 18053, complete genometRNA(Ile)-lysidine synthetase4e-45182
NC_015318:1455444:145731014573101458278969Hippea maritima DSM 10411 chromosome, complete genometRNA(Ile)-lysidine synthase8e-42171
NC_020054:4795000:4814976481497648163371362Fibrella aestuarina BUZ 2 drat genometRNA(Ile)-lysidine synthase1e-40167
NC_019960:801589:8015898015898029321344Prevotella dentalis DSM 3688 chromosome 1, complete sequencetRNA(Ile)-lysidine synthetase9e-35148
NC_013939:1023443:1026346102634610276051260Deferribacter desulfuricans SSM1, complete genomecell cycle protein MesJ4e-32139
NC_007576:1564739:1584015158401515854091395Lactobacillus sakei subsp. sakei 23K, complete genomePutative ATPase of the PP-loop superfamily, cell cycle protein1e-31138
NC_014758:1489761:1510126151012615113881263Calditerrivibrio nitroreducens DSM 19672 chromosome, completetRNA(ile)-lysidine synthetase9e-32138
NC_006448:5046:1078810788120531266Streptococcus thermophilus LMG 18311, complete genomeputative cell-cycle protein, MesJ/Ycf62 family9e-32138
NC_006449:5046:1078810788120531266Streptococcus thermophilus CNRZ1066, complete genomeputative cell-cycle protein, MesJ/Ycf62 family9e-32138
NC_008710:819389:8323068323068336251320Borrelia turicatae 91E135, complete genometRNA(Ile)-lysidine synthetase TilS1e-31137
NC_015760:8914:1070510705119701266Streptococcus salivarius CCHSS3, complete genometRNA(Ile)-lysidine synthase4e-31136
NC_009513:303043:3030433030433044371395Lactobacillus reuteri F275, complete genometRNA(Ile)-lysidine synthetase9e-31135
NC_008497:556365:5563655563655577171353Lactobacillus brevis ATCC 367, complete genometRNA(Ile)-lysidine synthetase, MesJ1e-29131
NC_015978:412856:4141134141134154981386Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein2e-29130
NC_014150:2055907:2077601207760120789531353Brachyspira murdochii DSM 12563 chromosome, complete genometRNA(Ile)-lysidine synthetase4e-28126
NC_017316:203233:2048042048042062971494Enterococcus faecalis OG1RF chromosome, complete genometRNA(Ile)-lysidine synthase1e-27124
NC_016605:272231:2738212738212751731353Pediococcus claussenii ATCC BAA-344 chromosome, complete genometRNA(Ile)-lysidine synthetase9e-27121
NC_004757:1089057:1109547110954711109231377Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein5e-26119
NC_015930:18969:1896918969202221254Lactococcus garvieae ATCC 49156, complete genomehypothetical protein5e-24112
NC_008525:1493317:1514730151473015161001371Pediococcus pentosaceus ATCC 25745, complete genometRNA(Ile)-lysidine synthetase, MesJ1e-22108
NC_007929:1397989:1418710141871014200681359Lactobacillus salivarius subsp. salivarius UCC118, complete genometRNA(Ile)-lysidine synthase TilS1e-22108
NC_013928:9494:1085510855121261272Streptococcus mutans NN2025, complete genomecell-cycle protein3e-22107
NC_014109:326500:3411323411323424961365Candidatus Riesia pediculicola USDA chromosome, complete genometRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase)6e-22105
NC_012121:139741:1624001624001636801281Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative PP-loop family protein4e-21103
NC_007604:1145373:1161580116158011625901011Synechococcus elongatus PCC 7942, complete genomeconserved hypothetical protein YCF621e-20101
NC_017285:913000:930916930916931875960Chlamydophila pneumoniae LPCoLN chromosome, complete genometRNA(Ile)-lysidine synthetase1e-1895.1
NC_004547:1174650:1174650117465011759721323Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecell cycle protein3e-1893.6
NC_007347:1215358:1217181121718112186351455Ralstonia eutropha JMP134 chromosome 1, complete sequencePP-loop1e-1791.3
NC_012880:3421500:3451366345136634527121347Dickeya dadantii Ech703, complete genometRNA(Ile)-lysidine synthetase1e-1791.3
NC_006055:769418:7837767837767849721197Mesoplasma florum L1, complete genomelysidine synthetase5e-1789.4
NC_014761:1196669:1212383121238312139511569Oceanithermus profundus DSM 14977 chromosome, complete genometRNA(ile)-lysidine synthetase1e-1688.2
NC_015725:926824:944242944242945102861Mycoplasma bovis Hubei-1 chromosome, complete genomehypothetical protein2e-1687.8
NC_009883:1492425:1500037150003715013291293Rickettsia bellii OSU 85-389, complete genometRNA(Ile)-lysidine synthetase5e-1686.3
NC_007940:1485006:1492614149261414939061293Rickettsia bellii RML369-C, complete genometRNA(Ile)-lysidine synthetase5e-1686.3
NC_016745:2785346:2812901281290128142321332Oceanimonas sp. GK1 chromosome, complete genometRNA(Ile)-lysidine synthetase5e-1582.8
NC_006576:456569:458214458214459065852Synechococcus elongatus PCC 6301, complete genomehypothetical protein YCF622e-1481.3
NC_020211:4168189:4189337418933741906681332Serratia marcescens WW4, complete genometRNA(Ile)-lysidine synthetase1e-1378.6
NC_008787:1345988:136834513683451369310966Campylobacter jejuni subsp. jejuni 81-176, complete genometRNA(Ile)-lysidine synthetase2e-1377.4
NC_011999:2023248:2039599203959920408101212Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein5e-1376.3
NC_007951:4608560:4627865462786546288751011Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein1e-1274.7
NC_014935:1999653:2030660203066020316941035Nitratifractor saLSUginis DSM 16511 chromosome, complete genometRNA(ile)-lysidine synthetase2e-1273.9
NC_013416:1091432:1094201109420110955471347Aggregatibacter actinomycetemcomitans D11S-1, complete genometRNA(Ile)-lysidine synthase4e-1273.2
NC_014039:334892:338052338052339005954Propionibacterium acnes SK137 chromosome, complete genometRNA(Ile)-lysidine synthetase8e-1272.4
NC_016513:1400899:1402383140238314037291347Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA mismatch repair protein8e-1272
NC_006085:308567:311745311745312680936Propionibacterium acnes KPA171202, complete genomehypothetical protein8e-1272
NC_016511:308244:311422311422312357936Propionibacterium acnes TypeIA2 P.acn31 chromosome, completehypothetical protein8e-1272
NC_016512:305240:310786310786311721936Propionibacterium acnes TypeIA2 P.acn17 chromosome, completehypothetical protein8e-1272
NC_016516:300846:302219302219303154936Propionibacterium acnes TypeIA2 P.acn33 chromosome, completehypothetical protein8e-1272
NC_016589:2875000:2903444290344429044511008Burkholderia sp. YI23 chromosome 1, complete sequencePP-loop domain-containing protein1e-1171.6
NC_015381:4182194:418259541825954183584990Burkholderia gladioli BSR3 chromosome 1, complete sequencePP-loop family protein1e-1171.6
NC_004545:96422:1153061153061166221317Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative cell cycle protein MesJ4e-1169.7
NC_011770:4542183:454432145443214545145825Pseudomonas aeruginosa LESB58, complete genomeputative ATPase of the PP-loop superfamily1e-1067.8
NC_018868:282738:299473299473300393921Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-1067.8
NC_008463:4342119:434425743442574345081825Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative ATPase of the PP-loop superfamily1e-1067.8
NC_007954:1823085:1826662182666218280921431Shewanella denitrificans OS217, complete genometRNA(Ile)-lysidine synthetase-like protein2e-1067.8
NC_009515:510121:531360531360532277918Methanobrevibacter smithii ATCC 35061, complete genomePP family ATPase2e-1067.4
NC_020063:2449554:246555224655522466487936Enterobacteriaceae bacterium strain FGI 57, complete genomeputative ATPase of the PP-loop superfamily implicated in cell cycle control7e-1065.9
NC_009648:1541699:154169915416991542634936Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeC32 tRNA thiolase8e-1065.5
NC_010473:1493983:149843314984331499368936Escherichia coli str. K-12 substr. DH10B, complete genomeputative tRNA 2-thiocytidine (s(2)C32) synthase1e-0965.1
NC_000913:1404000:140903714090371409972936Escherichia coli K12, complete genomepredicted C32 tRNA thiolase1e-0965.1
AC_000091:1407693:141272714127271413662936Escherichia coli W3110 DNA, complete genomepredicted C32 tRNA thiolase1e-0965.1
NC_012759:1296000:130109613010961302031936Escherichia coli BW2952 chromosome, complete genomeC32 tRNA thiolase1e-0965.1
CP002516:2580774:260536326053632606298936Escherichia coli KO11, complete genomePP-loop domain protein1e-0965.1
CP002185:1493280:149955214995521500487936Escherichia coli W, complete genomepredicted C32 tRNA thiolase1e-0965.1
NC_016902:2580774:260536326053632606298936Escherichia coli KO11FL chromosome, complete genomePP-loop domain-containing protein1e-0965.1
NC_011415:1472500:147444114744411475376936Escherichia coli SE11 chromosome, complete genomeC32 tRNA thiolase1e-0965.1
NC_012947:2366000:238526623852662386201936Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeC32 tRNA thiolase1e-0965.1
NC_012967:1403733:140818314081831409118936Escherichia coli B str. REL606 chromosome, complete genomeC32 tRNA thiolase1e-0965.1
NC_013716:1756545:176912717691271770062936Citrobacter rodentium ICC168, complete genometRNA 2-thiocytidine biosynthesis protein ttcA1e-0965.1
NC_016051:1429800:145592514559251456902978Thermococcus sp. AM4 chromosome, complete genomePP-loop superfamily ATPase2e-0964.3
NC_014153:436082:4554634554634565151053Thiomonas intermedia K12 chromosome, complete genometRNA(Ile)-lysidine synthetase2e-0964.3
NC_014121:1848971:185572818557281856663936Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeC32 tRNA thiolase3e-0963.5
NC_008825:564392:586478586478587419942Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-0963.5
NC_014315:1668366:168172916817291682613885Nitrosococcus watsoni C-113 chromosome, complete genomePP-loop domain-containing protein3e-0963.5
NC_011149:1429523:145488714548871455822936Salmonella enterica subsp. enterica serovar Agona str. SL483,YdaO4e-0963.2
NC_011294:1465500:146842814684281469363936Salmonella enterica subsp. enterica serovar Enteritidis strC32 tRNA thiolase4e-0963.2
NC_015761:1630000:163960516396051640540936Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-0963.2
NC_012917:2641000:265690226569022657837936Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePP-loop domain protein5e-0963.2
NC_014205:760428:763414763414764409996Staphylothermus hellenicus DSM 12710 chromosome, complete genomePP-loop domain protein5e-0962.8
NC_008800:2298000:230832423083242309265942Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,C32 tRNA thiolase2e-0861.2
NC_011529:1554500:155663715566371557608972Thermococcus onnurineus NA1, complete genomeATPase2e-0861.2
NC_009092:2282437:230676723067672307720954Shewanella loihica PV-4, complete genomePP-loop domain protein1e-0758.2
NC_008599:1489868:149288114928811493633753Campylobacter fetus subsp. fetus 82-40, complete genomePP-loop family protein2e-0757.8
NC_015731:25493:254932549326398906Nitrosomonas sp. Is79A3 chromosome, complete genometRNA 2-thiocytidine biosynthesis protein TtcA3e-0757
NC_009975:1203372:122850712285071229481975Methanococcus maripaludis C6, complete genomePP-loop domain protein1e-0655.1
NC_012563:3729817:374929537492953750044750Clostridium botulinum A2 str. Kyoto, complete genomePP-loop family protein1e-0655.1
NC_017378:1175639:118052011805201181281762Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein1e-0655.1
NC_017379:1233482:123836712383671239128762Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein2e-0654.7
NC_009699:3581376:360085536008553601604750Clostridium botulinum F str. Langeland chromosome, complete genomePP-loop family protein1e-0654.7
NC_017297:3594000:359947135994713600220750Clostridium botulinum F str. 230613 chromosome, complete genomePP-loop family protein1e-0654.7
NC_009698:3359766:338031733803173381066750Clostridium botulinum A str. Hall chromosome, complete genomePP-loop family protein2e-0654.3
NC_009697:3463736:348320934832093483958750Clostridium botulinum A str. ATCC 19397 chromosome, completePP-loop family protein2e-0654.3
NC_009495:3502000:350722135072213507970750Clostridium botulinum A str. ATCC 3502 chromosome, complete genomePP-loop family protein2e-0654.3
NC_014151:657382:6714666714666726261161Cellulomonas flavigena DSM 20109 chromosome, complete genometRNA(Ile)-lysidine synthetase3e-0653.5
NC_010520:3580000:358509335850933585842750Clostridium botulinum A3 str. Loch Maree, complete genomePP-loop family protein4e-0653.5
NC_005861:1027000:104063410406341041374741Candidatus Protochlamydia amoebophila UWE25, complete genomehypothetical protein4e-0653.1