Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:2366000 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
236603923695633525pyruvate ferredoxinflavodoxin oxidoreductaseQuickGO ontologyBLASTP
236993023710631134porin Gram-negative typeQuickGO ontologyBLASTP
23712042371638435UspA domain proteinQuickGO ontologyBLASTP
23725992372832234hypothetical proteinBLASTP
23731492373739591resolvaseQuickGO ontologyBLASTP
23739672374260294hypothetical proteinBLASTP
23742732374551279hypothetical proteinBLASTP
23745482375285738hypothetical proteinBLASTP
23752332375628396ParB domain protein nucleaseQuickGO ontologyBLASTP
237576623772231458potassium uptake protein TrkH familyQuickGO ontologyBLASTP
23773612377825465lysis proteinQuickGO ontologyBLASTP
23778222378355534LysozymeQuickGO ontologyBLASTP
23784612378733273hypothetical proteinBLASTP
23786992379043345hypothetical proteinBLASTP
23790482379260213Lysis S family proteinQuickGO ontologyBLASTP
23792592379393135hypothetical proteinBLASTP
23794042379559156hypothetical proteinBLASTP
23795562380044489hypothetical proteinBLASTP
23804862380707222FtsZ inhibitor proteinQuickGO ontologyBLASTP
23807072380877171bacteriophage proteinQuickGO ontologyBLASTP
23809522381227276hypothetical proteinBLASTP
23824212383230810recombination and repair protein RecTQuickGO ontologyBLASTP
23834742383683210hypothetical proteinBLASTP
23837622383977216hypothetical proteinBLASTP
238397923852141236integraseQuickGO ontologyBLASTP
23852662386201936C32 tRNA thiolaseQuickGO ontologyBLASTP
238633023877031374ATP-dependent RNA helicase DbpAQuickGO ontologyBLASTP
23877332387906174hypothetical protein
23881812389164984zinc transporterQuickGO ontologyBLASTP
238941923906511233diguanylate cyclase with PASPAC sensorQuickGO ontologyBLASTP
23906722391235564Smr proteinMutS2QuickGO ontologyBLASTP