Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2282437 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22824372283003567hypothetical proteinBLASTP
22832392284159921Inorganic diphosphataseQuickGO ontologyBLASTP
228425122866532403putative ATP-dependent protease La-relatedproteinQuickGO ontologyBLASTP
22869662287901936diguanylate cyclase with PASPAC sensorQuickGO ontologyBLASTP
22883252289239915hypothetical proteinBLASTP
22893132290248936putative dienelactone hydrolase-related enzymeQuickGO ontologyBLASTP
22903862291042657hypothetical proteinBLASTP
22910292291928900transcriptional regulator AraC familyQuickGO ontologyBLASTP
229364022949111272phage integrase family proteinQuickGO ontologyBLASTP
229523422968051572response regulator receiver modulated metal dependent phosphohydrolaseQuickGO ontologyBLASTP
22969982297495498hypothetical proteinBLASTP
229776022991871428cytochrome c oxidase cbb3-type subunit IQuickGO ontologyBLASTP
22992002299805606cytochrome c oxidase cbb3-type subunit IIQuickGO ontologyBLASTP
22998212299988168Cbb3-type cytochrome oxidase componentQuickGO ontologyBLASTP
22999882300959972cytochrome c oxidase cbb3-type subunit IIIQuickGO ontologyBLASTP
23010702301549480hypothetical proteinBLASTP
230155623039792424heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
23039762304161186cytochrome oxidase maturation protein cbb3-typeQuickGO ontologyBLASTP
23041582304850693hypothetical proteinBLASTP
23049062305655750transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
23057502306682933UspA domain proteinQuickGO ontologyBLASTP
23067672307720954PP-loop domain proteinQuickGO ontologyBLASTP
23078002308423624hypothetical proteinBLASTP
23084012309273873bax protein putativeQuickGO ontologyBLASTP
23093642310275912protein of unknown function UPF0052 and CofDQuickGO ontologyBLASTP
231033823115311194Aspartate transaminaseQuickGO ontologyBLASTP
2311927231201387tRNA-LeuQuickGO ontologyBLASTP
2312052231212574tRNA-CysQuickGO ontologyBLASTP
231247023139061437glyceraldehyde-3-phosphate dehydrogenase type IQuickGO ontologyBLASTP
23141432314949807hypothetical proteinBLASTP
231516123161711011glyceraldehyde-3-phosphate dehydrogenase type IQuickGO ontologyBLASTP
23162892316621333hypothetical protein
23168242317099276hypothetical proteinBLASTP
231721423185451332FAD dependent oxidoreductaseQuickGO ontologyBLASTP
23186062319172567GCN5-related N-acetyltransferaseQuickGO ontology
231929423203731080hypothetical protein
23204552321150696short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
232138723224661080hypothetical proteinBLASTP
232306523242521188efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
232425923274413183acriflavin resistance proteinQuickGO ontologyBLASTP