Pre_GI Gene

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Host: NC_008497 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008497:556365 Lactobacillus brevis ATCC 367, complete genome

Host Lineage: Lactobacillus brevis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactic acid bacterium used in fermentation. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism is used as a starter culture for various types of beer, sourdough, and silage fermentation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5563655577171353tRNAIle-lysidine synthetase MesJQuickGO ontologyBLASTP
557734558276543Hypoxanthine-guanine phosphoribosyltransferaseQuickGO ontologyBLASTP
5583855604842100ATP-dependent Zn proteaseQuickGO ontologyBLASTP
560597561484888Disulfide bond chaperones of the HSP33 familyQuickGO ontologyBLASTP
5614865625081023tRNA-dihydrouridine synthaseQuickGO ontologyBLASTP
562993564555156316S ribosomal RNAQuickGO ontologyBLASTP
56463556470975tRNA-IleQuickGO ontology
56473256480473tRNA-AlaQuickGO ontologyBLASTP
564974567891291823S ribosomal RNAQuickGO ontologyBLASTP
5679605680781195S ribosomal RNAQuickGO ontologyBLASTP
56808356815573tRNA-AsnQuickGO ontologyBLASTP
56818756826276tRNA-ThrQuickGO ontology
568502568822321cellobiose-specific PTS system IIC componentQuickGO ontologyBLASTP
5690325706391608Dipeptidetripeptide permeaseQuickGO ontologyBLASTP
570748571524777Predicted phosphohydrolaseQuickGO ontologyBLASTP
57160757168983tRNA-TyrQuickGO ontologyBLASTP
57169957177375tRNA-GlnQuickGO ontology
572001572804804Pyrroline-5-carboxylate reductaseQuickGO ontologyBLASTP
5728905740321143N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
574068574769702Transcriptional regulatorQuickGO ontologyBLASTP