Pre_GI Gene

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Host: NC_008525 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008525:1493317 Pediococcus pentosaceus ATCC 25745, complete genome

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14933171494135819NAD synthaseQuickGO ontologyBLASTP
149415314956161464Nicotinic acid phosphoribosyltransferaseQuickGO ontologyBLASTP
14957241496455732Teichoic acid biosynthesis proteinQuickGO ontologyBLASTP
14964831497184702Transcriptional regulatorQuickGO ontologyBLASTP
149721114983531143N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
14984191499210792Pyrroline-5-carboxylate reductaseQuickGO ontologyBLASTP
1499426149949772tRNA-GlnQuickGO ontology
1499501149958686tRNA-TyrQuickGO ontologyBLASTP
14996751500490816Predicted phosphohydrolaseQuickGO ontologyBLASTP
15004951501028534Dihydrofolate reductaseQuickGO ontologyBLASTP
150109615025621467Dipeptidetripeptide permeaseQuickGO ontologyBLASTP
1502655150272773tRNA-ThrQuickGO ontology
1502776150284873tRNA-AsnQuickGO ontologyBLASTP
150285415029711185S ribosomal RNAQuickGO ontologyBLASTP
15030651505987292323S ribosomal RNAQuickGO ontologyBLASTP
1506176150624873tRNA-AlaQuickGO ontologyBLASTP
1506254150632875tRNA-IleQuickGO ontology
15064051507984158016S ribosomal RNAQuickGO ontologyBLASTP
150844715099431497Lysyl-tRNA synthetase class IIQuickGO ontologyBLASTP
15100101511008999tRNA-dihydrouridine synthaseQuickGO ontologyBLASTP
15110921512006915Disulfide bond chaperones of the HSP33 familyQuickGO ontologyBLASTP
151202915141102082ATP-dependent Zn proteaseQuickGO ontologyBLASTP
15142041514740537Hypoxanthine-guanine phosphoribosyltransferaseQuickGO ontologyBLASTP
151473015161001371tRNAIle-lysidine synthetase MesJQuickGO ontologyBLASTP