Pre_GI Gene

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Host: NC_009012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:2661795 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
266040226618141413protein of unknown function DUF115QuickGO ontologyBLASTP
26617952662178384hypothetical proteinBLASTP
266216026641061947protein of unknown function DUF115QuickGO ontologyBLASTP
26641702664988819flagellin-like proteinQuickGO ontologyBLASTP
26650612665882822flagellin-like proteinQuickGO ontologyBLASTP
266610026675181419aldehyde dehydrogenaseQuickGO ontologyBLASTP
26677302667957228carbon storage regulator CsrAQuickGO ontologyBLASTP
26679292668408480protein of unknown function DUF180QuickGO ontologyBLASTP
26684382669016579hypothetical proteinBLASTP
26690602669968909flagellar hook-associated protein 3QuickGO ontologyBLASTP
267000926715681560flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
267157526730441470flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
26730642673564501hypothetical proteinBLASTP
26736782673971294anti-sigma-28 factor FlgMQuickGO ontologyBLASTP
26742042674647444regulatory protein MerRQuickGO ontologyBLASTP
26747522675414663phosphoribosyltransferaseQuickGO ontologyBLASTP
267540826776482241helicase RecDTraA familyQuickGO ontologyBLASTP
26777322678136405hypothetical protein
267839226795851194Methionine adenosyltransferaseQuickGO ontologyBLASTP
26799362680340405thioesterase family proteinQuickGO ontologyBLASTP
268050826823071800ATP-dependent metalloprotease FtsHQuickGO ontologyBLASTP
26824352682989555hypoxanthine phosphoribosyltransferaseQuickGO ontologyBLASTP
268314326845551413tRNAIle-lysidine synthetaseQuickGO ontologyBLASTP
268457126859081338replicative DNA helicaseQuickGO ontologyBLASTP