Pre_GI Gene

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Host: NC_007954 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007954:1823085 Shewanella denitrificans OS217, complete genome

Host Lineage: Shewanella denitrificans; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from the Gotland Deep, an anoxic basin in the central Baltic Sea in 1986 from a depth of 120-130 m. Denitrifying marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella denitrificans is a vigorous denitrifier, able to convert nitrite and nitrate to nitrogen. This organism has been isolated from seawater and may play a significant role in nitrogen cycling in marine environments.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
182308518265643480DNA polymerase III alpha subunitQuickGO ontologyBLASTP
182666218280921431tRNAIle-lysidine synthetase-like proteinQuickGO ontologyBLASTP
18284481829299852Integrase catalytic regionQuickGO ontologyBLASTP
18292961829607312transposase IS3IS911QuickGO ontologyBLASTP
18303731831347975hypothetical proteinBLASTP
18313441832285942Integrase catalytic regionQuickGO ontologyBLASTP
18324271833167741hypothetical proteinBLASTP
18335351834332798hypothetical proteinBLASTP
18348551835625771hypothetical protein
183685618379681113hypothetical protein
183798018396291650hypothetical protein
18397191840174456hypothetical protein
18403021840709408glutathione-dependent formaldehyde-activating GFAQuickGO ontologyBLASTP
18410441841805762ABC transporter periplasmic domainQuickGO ontologyBLASTP
18421271842570444glutaredoxinQuickGO ontology
18427641843483720regulatory protein TetRQuickGO ontology
184357518447081134secretion protein HlyDQuickGO ontologyBLASTP