Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:4623867:4667623 Pseudomonas putida GB-1 chromosome, complete genome

Start: 4667623, End: 4668270, Length: 648

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009350:6987:194781947820107630Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative partition protein2e-40165
NC_015147:9761:243062430624938633Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeplasmid segregation oscillating ATPase ParF5e-37154
NC_008538:46469:505885058851220633Arthrobacter sp. FB24 plasmid 2, complete sequenceCobyrinic acid a,c-diamide synthase8e-36150
NC_007941:11319:523135231352957645Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein5e-34144
NC_010815:40357:403574035741007651Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceCobyrinic acid ac-diamide synthase5e-31134
NC_016819:1:273927393374636Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq202,chromosome partitioning ATPase1e-29129
NC_007110:1:200402004020675636Rickettsia felis URRWXCal2 plasmid pRF, complete sequencePlasmid stability protein ParA6e-29127
NC_013958:29548:295482954830222675Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceCobyrinic acid ac-diamide synthase2e-27122
NC_009350:137645:150244150244151139896Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete2e-25115
NC_012732:1:6016011332732Rickettsia peacockii str. Rustic plasmid pRPR, complete sequenceplasmid stability protein ParA2e-25115
NC_017378:1518529:153698015369801537648669Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein3e-24111
NC_017372:748097:768038768038768688651Helicobacter pylori India7 chromosome, complete genomehypothetical protein4e-24111
NC_017366:1055319:107175710717571072407651Helicobacter pylori F32, complete genomePARA protein4e-24111
NC_017362:1512959:153600315360031536671669Helicobacter pylori Lithuania75 chromosome, complete genomehypothetical protein7e-24110
NC_017379:1035464:103816410381641038820657Helicobacter pylori Puno135 chromosome, complete genomePARA protein1e-23109
NC_017375:77142:899468994690623678Helicobacter pylori 83 chromosome, complete genomePARA protein2e-23109
NC_017376:57500:787557875579411657Helicobacter pylori SNT49 chromosome, complete genomeputative chromosome partitioning protein4e-23108
NC_014555:1526775:155866315586631559319657Helicobacter pylori PeCan4 chromosome, complete genomechromosome partitioning protein ParA4e-23108
NC_011333:1040192:106684210668421067498657Helicobacter pylori G27 chromosome, complete genomePARA protein3e-23108
NC_014256:485969:505645505645506313669Helicobacter pylori B8 chromosome, complete genomehypothetical protein2e-23108
NC_017063:834674:868078868078868746669Helicobacter pylori ELS37 chromosome, complete genomehypothetical protein2e-23108
NC_017371:1470582:149017814901781490846669Helicobacter pylori Gambia94/24 chromosome, complete genomehypothetical protein2e-23108
NC_017361:1528239:154924715492471549909663Helicobacter pylori SouthAfrica7 chromosome, complete genomePARA protein2e-23108
NC_014560:1366747:139539413953941396062669Helicobacter pylori SJM180 chromosome, complete genomehypothetical protein2e-23108
NC_017361:930280:951974951974952630657Helicobacter pylori SouthAfrica7 chromosome, complete genomePARA protein2e-23108
NC_000915:1044000:106268710626871063343657Helicobacter pylori 26695, complete genomePARA protein9e-23107
NC_017358:220900:248978248978249634657Helicobacter pylori Cuz20 chromosome, complete genomePARA protein9e-23107
NC_018939:1044000:106270510627051063361657Helicobacter pylori 26695 chromosome, complete genomePARA protein9e-23107
NC_017371:1030148:105018210501821050838657Helicobacter pylori Gambia94/24 chromosome, complete genomechromosome partitioning protein ParA6e-23107
NC_011498:448000:470785470785471441657Helicobacter pylori P12, complete genomechromosome partitioning protein4e-23107
NC_014256:448710:470816470816471472657Helicobacter pylori B8 chromosome, complete genomeputative chromosome partitioning protein1e-22106
NC_017367:278916:305477305477306133657Helicobacter pylori F57, complete genomePARA protein1e-22106
NC_005140:960261:966338966338966979642Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-22105
NC_010698:870312:892053892053892709657Helicobacter pylori Shi470, complete genomePARA protein3e-22105
NC_015424:4251369:426797242679724268619648Aeromonas veronii B565 chromosome, complete genomeParA family protein1e-2099.8
NC_007275:1:577457746427654Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeParA family protein2e-1685.9
NC_015221:12389:217952179522427633Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencecobyrinic acid ac-diamide synthase6e-1684
NC_014840:205723:215231215231215851621Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceCobyrinic acid ac-diamide synthase3e-1581.6
NC_010170:4800000:482228048222804823236957Bordetella petrii, complete genomeputative partition protein2e-1479
NC_007643:1781723:179601217960121796650639Rhodospirillum rubrum ATCC 11170, complete genomeCobyrinic acid a,c-diamide synthase3e-1478.6
NC_010682:1593108:160025316002531600951699Ralstonia pickettii 12J chromosome 1, complete sequenceCobyrinic acid ac-diamide synthase3e-1478.6
NC_012752:1:106051060511243639Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidconserved hypothetical protein HDEF_p00108e-1477
NC_014305:97055:109690109690110310621Erwinia billingiae Eb661 plasmid pEB170, complete sequencePlasmid partitioning protein F1e-1376.6
NC_007509:1383013:138986513898651390560696Burkholderia sp. 383 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase2e-1376.3
NC_009254:23000:292242922429919696Burkholderia vietnamiensis G4 chromosome 3, complete sequencecobyrinic acid a,c-diamide synthase3e-1375.1
NC_010557:274945:283905283905284600696Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase4e-1374.7
NC_008392:542000:553230553230553925696Burkholderia cepacia AMMD chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase4e-1374.7
NC_010512:734834:740950740950741645696Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase5e-1374.3
NC_008544:348500:354911354911355606696Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase7e-1373.9
NC_008062:370902:377091377091377786696Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase7e-1373.9
NC_009720:4406991:444263144426314443284654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase2e-1272.8
NC_016835:128757:142563142563143189627Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,chromosome partitioning ATPase2e-1272.4
NC_014506:157396:157396157396158049654Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeplasmid partitioning protein3e-1271.6
NC_000921:1007519:103734310373431037885543Helicobacter pylori J99, complete genomehypothetical protein5e-1270.9
NC_008757:111292:122119122119122787669Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeATPase involved in chromosome partitioning-like protein6e-1270.9
NC_009668:445134:511677511677512330654Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecobyrinic acid ac-diamide synthase8e-1270.5
NC_009720:622262:653829653829654482654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase1e-1170.1
NC_015853:1:108241082411453630Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequencepartition protein A1e-1169.7
NC_012560:3667177:366717736671773667815639Azotobacter vinelandii DJ, complete genomeATPase, ParA type2e-1169.3
NC_021150:3667176:366717636671763667814639Azotobacter vinelandii CA6, complete genomeATPase, ParA type2e-1169.3
NC_018691:3041851:306362230636223064260639Alcanivorax dieselolei B5 chromosome, complete genomePlasmid segregation oscillating ATPase ParF2e-1168.9
NC_017059:2957911:297497729749772975606630Rhodospirillum photometricum DSM 122, complete genomeATPase involved in chromosome partitioning,putative2e-1168.9
NC_017249:18493:441224412244760639Bradyrhizobium japonicum USDA 6, complete genomepartition protein4e-1168.2
NC_004463:18497:441304413044768639Bradyrhizobium japonicum USDA 110, complete genomeputative partition protein4e-1168.2
NC_008577:1455000:147866614786661479304639Shewanella sp. ANA-3 chromosome 1, complete sequenceCobyrinic acid a,c-diamide synthase6e-1167.4
NC_009439:3770282:379108337910833791721639Pseudomonas mendocina ymp, complete genomecobyrinic acid a,c-diamide synthase8e-1167
NC_016147:1961000:198868219886821989320639Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-1066.6
NC_009445:6621996:666380366638036664465663Bradyrhizobium sp. ORS 278 chromosome, complete genomepartition protein (ParA)1e-1066.2
NC_003295:2787371:280827628082762808914639Ralstonia solanacearum GMI1000, complete genomePUTATIVE PARTITION PROTEIN1e-1066.2
NC_014910:242845:264014264014264652639Alicycliphilus denitrificans BC chromosome, complete genomecobyrinic acid ac-diamide synthase2e-1065.5
NC_015381:2859000:289466928946692895307639Burkholderia gladioli BSR3 chromosome 1, complete sequencecobyrinic Acid a,c-diamide synthase3e-1065.5
NC_017375:1498000:150444515044451504741297Helicobacter pylori 83 chromosome, complete genomePARA protein5e-1064.7
NC_015556:2265940:228756922875692288207639Pseudomonas fulva 12-X chromosome, complete genomeCobyrinic acid ac-diamide synthase4e-1064.7
NC_008344:811386:830575830575831204630Nitrosomonas eutropha C91, complete genomeCobyrinic acid a,c-diamide synthase5e-1064.3
NC_008752:725189:747663747663748301639Acidovorax avenae subsp. citrulli AAC00-1, complete genomeCobyrinic acid a,c-diamide synthase6e-1064.3
NC_010943:1332243:134940913494091350047639Stenotrophomonas maltophilia K279a, complete genomeputative ParA/CobQ/CobB/MinD nucleotide binding domain protein1e-0963.5
NC_008758:12000:341703417034868699Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeCobyrinic acid a,c-diamide synthase2e-0962.8
NC_010511:3674178:372664037266403727275636Methylobacterium sp. 4-46 chromosome, complete genomecobyrinic acid ac-diamide synthase2e-0962.4
NC_013862:27991:7979714636Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceCobyrinic acid ac-diamide synthase2e-0962.4
NC_012808:1979000:198942619894261990091666Methylobacterium extorquens AM1, complete genomeputative ParA-like protein (chromosome partitioning)3e-0962
NC_010514:6000:133121331213956645Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completeCobyrinic acid ac-diamide synthase3e-0961.6
NC_015694:48344:103010301659630Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceCobyrinic acid ac-diamide synthase9e-0960.5
NC_011894:3578500:357959235795923580242651Methylobacterium nodulans ORS 2060, complete genomecobyrinic acid ac-diamide synthase9e-0960.5
NC_011365:1135750:116314511631451163975831Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeCobyrinic acid ac-diamide synthase3e-0858.5
NC_014842:19411:428534285343497645Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceputative plasmid partition protein6e-0857.8
NC_015580:3779724:377972437797243780536813Novosphingobium sp. PP1Y, complete genomechromosome partitioning protein1e-0757
NC_015677:2939301:296296429629642963806843Ramlibacter tataouinensis TTB310 chromosome, complete genomechromosome partitioning protein3e-0755.5
NC_005296:4574213:461630746163074616981675Rhodopseudomonas palustris CGA009, complete genomeATPase, ParA type8e-0753.9
NC_013285:1:410441044700597Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein1e-0653.5
NC_017028:261589:275545275545276345801Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completechromosome partitioning protein-like protein1e-0653.1
NC_009900:180970:195663195663196478816Rickettsia massiliae MTU5, complete genomeChromosome partitioning protein-like protein1e-0653.1
NC_016516:1345840:135543513554351356019585Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeplasmid partition protein ParA2e-0652.8
NC_016511:1354949:136454513645451365129585Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeplasmid partition protein ParA2e-0652.8
NC_009930:4909:121201212012761642Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceParA protein, putative2e-0652.8
NC_016512:1357225:136399013639901364574585Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeplasmid partition protein ParA2e-0652.4
NC_009927:253250:266190266190266798609Acaryochloris marina MBIC11017 plasmid pREB2, complete sequencechromosome partitioning protein, ParA family, putative4e-0651.6
NC_006085:1379370:138896613889661389631666Propionibacterium acnes KPA171202, complete genomeplasmid partition protein ParA4e-0651.6
NC_016913:974212:974729974729975529801Rickettsia rickettsii str. Brazil chromosome, complete genomechromosome partitioning ATPase4e-0651.6
NC_012730:652092:654517654517655317801Rickettsia peacockii str. Rustic, complete genomeATPases involved in chromosome partitioning3e-0651.6
NC_007109:1206421:121016412101641210964801Rickettsia felis URRWXCal2, complete genomeChromosome partitioning protein5e-0651.2
NC_014550:3377834:340415434041543404747594Arthrobacter arilaitensis Re117, complete genomeParA family protein5e-0651.2
NC_007650:2901751:290851329085132909175663Burkholderia thailandensis E264 chromosome II, complete sequenceParA family protein5e-0651.2
NC_016050:182218:196973196973197773801Rickettsia japonica YH, complete genomechromosome partitioning protein-like protein6e-0651.2
NC_012988:2455807:249229024922902492991702Methylobacterium extorquens DM4, complete genomepartitioning protein, ATPase6e-0650.8