Pre_GI Gene

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Host: NC_008544 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008544:348500 Burkholderia cenocepacia HI2424 chromosome 3, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
348722349306585hypothetical proteinBLASTP
349424349915492flavodoxinnitric oxide synthaseQuickGO ontologyBLASTP
350119350772654transcriptional regulator TetR familyQuickGO ontologyBLASTP
3508563519801125Zn-dependent hydrolases of the beta-lactamase fold-like proteinQuickGO ontologyBLASTP
3521083531241017transcriptional regulator AraC familyQuickGO ontologyBLASTP
353522353986465hypothetical protein
354400354642243hypothetical protein
354911355606696Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
3555993566301032parB-like partition proteinsQuickGO ontologyBLASTP
3567263580421317hypothetical proteinBLASTP
359995360243249hypothetical proteinBLASTP
360434360796363hypothetical proteinBLASTP
360966361856891transcriptional regulator LysR familyQuickGO ontologyBLASTP
3619343632951362Adenylosuccinate synthaseQuickGO ontologyBLASTP
363596364546951transcriptional regulator LysR familyQuickGO ontologyBLASTP
364819365790972aliphatic sulfonates family ABC transporter periplsmic ligand-binding proteinQuickGO ontologyBLASTP
3658523669731122transcriptional regulator AraC familyQuickGO ontologyBLASTP
367430368311882transcriptional regulator LysR familyQuickGO ontologyBLASTP