Pre_GI: BLASTN Hits

Some Help

Query: NC_008463:282565 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 282565, End: 320736, Length: 38172

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:5019887*5019887505160731721Azotobacter vinelandii CA6, complete genome08005BLASTN svgBLASTP svg
NC_012560:5019900*5019900505162031721Azotobacter vinelandii DJ, complete genome08005BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete06379BLASTN svgBLASTP svg
NC_015942:2293455*2293455231259919145Acidithiobacillus ferrivorans SS3 chromosome, complete genome03418BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome02397BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome02290BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome02133BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome01895BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome01403BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome01340BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome01340BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome01247BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome01207BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome01207BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome01055BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome0991BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome0916BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome0722BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome0710BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome0706BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome0702BLASTN svgBLASTP svg
NC_008027:55850755850758141922913Pseudomonas entomophila L48, complete genome0672BLASTN svgBLASTP svg
NC_007492:23107932310793233159920807Pseudomonas fluorescens PfO-1, complete genome4e-108400BLASTN svgBLASTP svg
NC_015556:45433804543380456955726178Pseudomonas fulva 12-X chromosome, complete genome1e-89339BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome5e-89337BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome5e-89337BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome3e-84321BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome1e-83319BLASTN svgBLASTP svg
NC_010468:1130000*1130000115350023501Escherichia coli ATCC 8739, complete genome7e-79303BLASTN svgBLASTP svg
NC_021066:3028421*3028421305110422684Raoultella ornithinolytica B6, complete genome4e-74287BLASTN svgBLASTP svg
NC_010498:2847359*2847359287165924301Escherichia coli SMS-3-5, complete genome4e-74287BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome4e-74287BLASTN svgBLASTP svg
AP010958:32387423238742326213723396Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-74287BLASTN svgBLASTP svg
NC_011750:2928990*2928990296940040411Escherichia coli IAI39 chromosome, complete genome2e-73285BLASTN svgBLASTP svg
CP002185:2919752*2919752294461024859Escherichia coli W, complete genome1e-71280BLASTN svgBLASTP svg
CP002516:1165726*1165726119130025575Escherichia coli KO11, complete genome1e-71280BLASTN svgBLASTP svg
NC_004741:2741971*2741971276422322253Shigella flexneri 2a str. 2457T, complete genome6e-67264BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome6e-67264BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome3e-59238BLASTN svgBLASTP svg
NC_008563:2946391*2946391296667220282Escherichia coli APEC O1, complete genome2e-57232BLASTN svgBLASTP svg
NC_007946:29313642931364295051219149Escherichia coli UTI89, complete genome2e-57232BLASTN svgBLASTP svg
NC_021150:33039593303959332159917641Azotobacter vinelandii CA6, complete genome3e-56228BLASTN svgBLASTP svg
NC_012560:33039613303961332159917639Azotobacter vinelandii DJ, complete genome3e-56228BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str8e-54220BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-52214BLASTN svgBLASTP svg
NC_011149:28298112829811285287123061Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-51212BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-51212BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome2e-51212BLASTN svgBLASTP svg
NC_010102:28817142881714290709925386Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-49204BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome5e-49204BLASTN svgBLASTP svg
NC_007651:36564333656433367931922887Burkholderia thailandensis E264 chromosome I, complete sequence3e-44188BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence3e-44188BLASTN svgBLASTP svg
NC_008061:21930002193000221082217823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-43186BLASTN svgBLASTP svg
NC_008543:61000610008061919620Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-43186BLASTN svgBLASTP svg
NC_011080:28979772897977291952121545Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-42180BLASTN svgBLASTP svg
NC_009439:37702823770282380177231491Pseudomonas mendocina ymp, complete genome3e-41178BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-40174BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-36161BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-36161BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-35159BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome2e-33153BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome9e-29137BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome9e-26127BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome9e-26127BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome9e-26127BLASTN svgBLASTP svg
NC_004088:4202247*4202247422568123435Yersinia pestis KIM, complete genome9e-26127BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome9e-26127BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome6e-24121BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome9e-23117BLASTN svgBLASTP svg
NC_009667:1341000*1341000136313822139Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence9e-23117BLASTN svgBLASTP svg
NC_010515:14286641428664144787219209Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-21113BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-21113BLASTN svgBLASTP svg
NC_003317:392271*39227141315320883Brucella melitensis 16M chromosome I, complete sequence2e-20109BLASTN svgBLASTP svg
NC_004310:1578918*1578918160110922192Brucella suis 1330 chromosome I, complete sequence2e-20109BLASTN svgBLASTP svg
NC_006932:1596732*1596732161909922368Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-20109BLASTN svgBLASTP svg
NC_007618:1593886*1593886161751623631Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-20109BLASTN svgBLASTP svg
NC_010103:1577750*1577750160141623667Brucella canis ATCC 23365 chromosome I, complete sequence2e-20109BLASTN svgBLASTP svg
NC_010167:1085106*1085106110813423029Brucella suis ATCC 23445 chromosome II, complete sequence2e-20109BLASTN svgBLASTP svg
NC_010742:1595065*1595065161869323629Brucella abortus S19 chromosome 1, complete sequence2e-20109BLASTN svgBLASTP svg
NC_015857:1609670*1609670163209922430Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-20109BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome8e-20107BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome3e-19105BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome1e-18103BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_006350:19096391909639194004630408Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_007434:24497212449721247743327713Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014323:11962091196209123265936451Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_002946:10201751020175106499344819Neisseria gonorrhoeae FA 1090, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012792:38567038567040991424245Variovorax paradoxus S110 chromosome 2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014541:3642241*3642241367858636346Ferrimonas balearica DSM 9799 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014817:142976*14297616583322858Asticcacaulis excentricus CB 48 chromosome 2, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_014973:1941500*1941500196723925740Geobacter sp. M18 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011146:1998981*1998981205724258262Geobacter bemidjiensis Bem, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_014532:35960973596097363859942503Halomonas elongata DSM 2581, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-1179.8BLASTN svgBLASTP svg
NC_007963:3553678*3553678357230918632Chromohalobacter salexigens DSM 3043, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015424:23162282316228235664140414Aeromonas veronii B565 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015424:25107642510764253353522772Aeromonas veronii B565 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020302:858218582114074254922Corynebacterium halotolerans YIM 70093 = DSM 44683, complete1e-0973.8BLASTN svgBLASTP svg
NC_015859:1099919*1099919113350433586Corynebacterium variabile DSM 44702 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011666:2109274*2109274213911129838Methylocella silvestris BL2, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014010:1392536*1392536145077158236Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete5e-0971.9BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015580:3834244*3834244385840724164Novosphingobium sp. PP1Y, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015312:1220500*1220500124609925600Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003317:1030220*1030220105366423445Brucella melitensis 16M chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome7e-0867.9BLASTN svgBLASTP svg
NC_014972:2798670*2798670282159922930Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013209:2248119*2248119229545347335Acetobacter pasteurianus IFO 3283-01, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008739:41793417936534823556Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_007347:3612918*3612918363789324976Ralstonia eutropha JMP134 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete1e-0663.9BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014800:32986132986135277422914Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete1e-0663.9BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009654:1729159*1729159175248223324Marinomonas sp. MWYL1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:583060*58306060772824669Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome4e-0661.9BLASTN svgBLASTP svg