Pre_GI Gene

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Host: NC_012792 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012792:385670 Variovorax paradoxus S110 chromosome 2, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3856703868361167Mandelate racemasemuconate lactonizing proteinQuickGO ontologyBLASTP
3870983900252928type VI secretion system Vgr family proteinQuickGO ontologyBLASTP
3900783949074830RHS proteinQuickGO ontologyBLASTP
394904395347444hypothetical proteinBLASTP
398114398401288hypothetical proteinBLASTP
398432398938507blue type 1 copper domain proteinQuickGO ontologyBLASTP
3989974004121416multicopper oxidase type 3QuickGO ontologyBLASTP
4004504018771428putative copper resistance-related lipoproteinQuickGO ontologyBLASTP
401874402224351hypothetical protein
402342402503162hypothetical protein
4029134044331521Aldehyde dehydrogenase NADQuickGO ontologyBLASTP
4047844063221539diguanylate cyclaseQuickGO ontologyBLASTP
4065124078491338major facilitator superfamily MFS_1QuickGO ontologyBLASTP
4078944089521059Rieske 2Fe-2S domain proteinQuickGO ontologyBLASTP
408949409914966Phthalate 45-dioxygenaseQuickGO ontologyBLASTP