Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:98488 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
984889976812814-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
999481013901443Succinic semialdehyde dehydrogenaseQuickGO ontologyBLASTP
101677102312636Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
1023581037611404Flavoprotein monooxygenaseQuickGO ontologyBLASTP
10377410385077tRNA-ArgQuickGO ontologyBLASTP
103896104600705hypothetical proteinBLASTP
1049511063691419Transposase IS4QuickGO ontologyBLASTP
106580107563984Transposase IS4QuickGO ontologyBLASTP
1082111094521242hypothetical proteinBLASTP
1094521113231872Protein of unknown function DUF87QuickGO ontologyBLASTP
111332111541210hypothetical proteinBLASTP
112435112968534hypothetical proteinBLASTP
112987113487501Protein of unknown function DUF796QuickGO ontologyBLASTP
113906114502597hypothetical protein
114514114891378hypothetical proteinBLASTP
1157131168731161hypothetical proteinBLASTP
116991117812822Integrase catalytic regionQuickGO ontologyBLASTP
117869118168300Transposase IS3IS911QuickGO ontologyBLASTP
118370118735366hypothetical proteinBLASTP
1189461203041359Major facilitator superfamilyQuickGO ontologyBLASTP
120719121144426hypothetical proteinBLASTP
121508122362855hypothetical protein
122362122793432hypothetical protein
122810123193384hypothetical proteinBLASTP
123930124664735hypothetical proteinBLASTP
125003125455453hypothetical proteinBLASTP
125598126362765hypothetical proteinBLASTP
126577127209633Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
1272741284371164Aminotransferase class I and IIQuickGO ontologyBLASTP
1284341294861053hypothetical protein
130166130936771Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
131018131647630regulatory protein TetRQuickGO ontologyBLASTP
131737132393657NADPH dehydrogenase quinoneQuickGO ontologyBLASTP
132718133539822Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
1337791353261548Hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
135597135953357hypothetical proteinBLASTP
135970136410441Protein of unknown function DUF805QuickGO ontologyBLASTP
136494136931438Glutathione-dependent formaldehyde-activating GFAQuickGO ontologyBLASTP