Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:3655545 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
365414236555481407type II secretion system protein EQuickGO ontologyBLASTP
365554536578962352type II and III secretion system proteinQuickGO ontologyBLASTP
36578933658438546General secretion pathway M proteinQuickGO ontologyBLASTP
365843136595761146probable type II secretion system proteinQuickGO ontologyBLASTP
36595733660526954General secretion pathway protein KQuickGO ontologyBLASTP
36605353660993459General secretion pathway protein GQuickGO ontologyBLASTP
36611403661520381General secretion pathway protein IQuickGO ontologyBLASTP
36620873662356270hypothetical protein
36624833662845363hypothetical proteinBLASTP
36638403664181342hypothetical proteinBLASTP
36642133664641429hypothetical proteinBLASTP
36647273665113387hypothetical proteinBLASTP
36656583666140483GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
36664683666755288hypothetical protein
36667523667474723Animal peptidoglycan recognition protein PGRPQuickGO ontologyBLASTP
36674743668013540PAARQuickGO ontologyBLASTP
366838536694641080ATPase domain proteinQuickGO ontologyBLASTP
36696953670435741hypothetical protein
36705553670926372hypothetical proteinBLASTP
36710273672019993hypothetical proteinBLASTP
36723473672778432putative general secretion pathway protein CQuickGO ontologyBLASTP
36729123673364453General secretion pathway protein HQuickGO ontologyBLASTP
36733613673969609hypothetical proteinBLASTP
36741103675048939Putative FecRQuickGO ontologyBLASTP
36750823675633552Sigma-24 FecIQuickGO ontologyBLASTP
36756303676349720SecretinTonB short-likeQuickGO ontologyBLASTP
36765003676814315hypothetical protein
36768913677331441Alkylhydroperoxidase AhpD coreQuickGO ontologyBLASTP
367753036789661437regulatory protein GntR HTHQuickGO ontologyBLASTP
36790873679380294Antibiotic biosynthesis monooxygenaseQuickGO ontology
36795753680027453Cupin regionQuickGO ontologyBLASTP
36802693680982714hypothetical protein
368125136861374887NAD-glutamate dehydrogenaseQuickGO ontologyBLASTP