Pre_GI Gene

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Host: CP002516 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002516:1165726 Escherichia coli KO11, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1165726116700612814-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
116702011684681449succinic semialdehyde dehydrogenaseQuickGO ontologyBLASTP
116849111697591269FAD dependent oxidoreductaseQuickGO ontologyBLASTP
11697791170756978protein of unknown function CsiDQuickGO ontologyBLASTP
117109211721351044alpha amylase all-betaQuickGO ontologyBLASTP
11722651172564300transposase IS3IS911 family proteinQuickGO ontologyBLASTP
11725611173427867Integrase catalytic regionQuickGO ontologyBLASTP
117357911752971719ATP-binding region ATPase domain proteinQuickGO ontologyBLASTP
117529911770471749hypothetical proteinBLASTP
11771191177535417hypothetical proteinBLASTP
117757411788031230integrase family proteinQuickGO ontologyBLASTP
11795461180028483SsrA-binding proteinQuickGO ontologyBLASTP
11801871180636450cyclasedehydraseQuickGO ontologyBLASTP
11806261180916291protein of unknown function UPF0125QuickGO ontologyBLASTP
11809781181319342SmpAOmlA domain-containing proteinQuickGO ontologyBLASTP
118146811831291662DNA repair protein RecNQuickGO ontologyBLASTP
11832151184093879ATP-NADAcoX kinaseQuickGO ontologyBLASTP
11842161184809594GrpE proteinQuickGO ontologyBLASTP
118486411861051242protein of unknown function DUF21QuickGO ontologyBLASTP
11861711187037867cytochrome c assembly proteinQuickGO ontologyBLASTP
118712911884901362signal recognition particle proteinQuickGO ontologyBLASTP
11887391188987249ribosomal protein S16QuickGO ontologyBLASTP
1189006118955454916S rRNA processing protein RimMQuickGO ontologyBLASTP
11895851190352768tRNA guanine-N1-methyltransferaseQuickGO ontologyBLASTP
11903941190741348ribosomal protein L19QuickGO ontologyBLASTP
11908181191300483OmpAMotB domain proteinQuickGO ontologyBLASTP