Pre_GI Gene

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Host: NC_007347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007347:3612918 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
361291836144291512spermidine synthaseQuickGO ontologyBLASTP
361445136161181668hypothetical proteinBLASTP
36160823616552471hypothetical protein
36166663617544879heat shock protein HtpXQuickGO ontologyBLASTP
361762436186851062hypothetical proteinBLASTP
36186903619034345hypothetical proteinBLASTP
361905036208191770RecombinaseQuickGO ontologyBLASTP
36215233621825303hypothetical protein
36220913622426336hypothetical protein
362271436240481335hypothetical proteinBLASTP
36242293624780552hypothetical protein
36252223625824603Resolvase N-terminalResolvase helix-turn-helix regionQuickGO ontologyBLASTP
36261003626786687hypothetical proteinBLASTP
36269443627276333probable oxidoreductaseQuickGO ontologyBLASTP
36275183628354837MltA-interacting MipAQuickGO ontologyBLASTP
36286223629005384hypothetical protein
36290223629255234hypothetical protein
3629526362960176tRNA-ArgQuickGO ontologyBLASTP
36299513630844894Cytochrome c class IQuickGO ontologyBLASTP
363092836323971470coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
363260436337431140putative ABC-type branched-chain amino acid transport systems periplasmic componentQuickGO ontology
363372936348051077ATP-binding region ATPase-likeHistidine kinase HAMP regionHistidine kinase A N-terminalQuickGO ontologyBLASTP
36348103635541732Response regulator receiverTranscriptional regulatory protein C-terminalQuickGO ontologyBLASTP
363577936378932115UvrDREP helicaseQuickGO ontologyBLASTP