Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:2847359 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
284735928490201662DNA repair protein RecNQuickGO ontologyBLASTP
28491692849510342SmpAOmlA family lipoproteinQuickGO ontologyBLASTP
28495722849862291RnfH family proteinQuickGO ontologyBLASTP
28498522850328477polyketide cyclasedehydrase family proteinQuickGO ontologyBLASTP
28504602850942483SsrA-binding proteinQuickGO ontologyBLASTP
285168028563774698hypothetical proteinBLASTP
28563132856432120hypothetical proteinBLASTP
28571842857933750hypothetical proteinBLASTP
2859380285945576tRNA-MetQuickGO ontologyBLASTP
286001228622642253alpha amylase family proteinQuickGO ontologyBLASTP
28626012863578978protein CsiDQuickGO ontologyBLASTP
286359828648661269FAD dependent oxidoreductaseQuickGO ontologyBLASTP
286488928663371449succinate-semialdehyde dehydrogenase NADPQuickGO ontologyBLASTP
2866351286763112814-aminobutyrate transaminaseQuickGO ontologyBLASTP
286786828692681401gamma-aminobutyrate permeaseQuickGO ontologyBLASTP
28692892869951663gab operon transcriptional repressor CsiRQuickGO ontologyBLASTP
28699522870401450phospholipid-binding proteinQuickGO ontologyBLASTP
28704852870643159hypothetical proteinBLASTP
28708262871125300ArsR family transcriptional regulatorQuickGO ontologyBLASTP
28711352871659525putative inner membrane proteinQuickGO ontologyBLASTP