Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:2946391 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29460052946394390bacteriophage V crossover junction endodeoxyribonucleaseQuickGO ontologyBLASTP
29463912946717327hypothetical proteinBLASTP
29467142947367654DNA adenine methylaseQuickGO ontologyBLASTP
29473672947855489hypothetical proteinBLASTP
2947678294775376tRNA-AsnQuickGO ontology
29478582948799942hypothetical proteinBLASTP
29488092949147339hypothetical proteinBLASTP
29491442949707564e14 prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
29497392950044306hypothetical proteinBLASTP
29500302950704675putative phage repressorQuickGO ontologyBLASTP
29509072951419513hypothetical proteinBLASTP
29515702952250681hypothetical proteinBLASTP
29523162953140825hypothetical proteinBLASTP
29532682953792525hypothetical proteinBLASTP
29539012954767867hypothetical proteinBLASTP
295497629561481173hypothetical proteinBLASTP
29561402956739600hypothetical proteinBLASTP
29567682957094327hypothetical proteinBLASTP
29570992958010912hypothetical proteinBLASTP
29579762958239264hypothetical proteinBLASTP
29588712959848978hypothetical proteinBLASTP
295986829611361269hypothetical proteinBLASTP
296115929626071449succinate-semialdehyde dehydrogenase I NADP-dependentQuickGO ontologyBLASTP
2962615296390112874-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
296407629655391464GABA permeaseQuickGO ontologyBLASTP
29655422966222681putative transcriptional regulator YgaEQuickGO ontologyBLASTP
29662232966672450hypothetical proteinBLASTP