Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:2310793 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23107932311446654ABC transporter-likeQuickGO ontologyBLASTP
231146723139142448Protein of unknown function DUF214QuickGO ontologyBLASTP
231390423149711068hypothetical proteinBLASTP
23149932315301309hypothetical protein
23155762316160585hypothetical proteinBLASTP
23165412316942402ISPsy11 transposase OrfAQuickGO ontologyBLASTP
23169662317763798Integrase catalytic regionQuickGO ontologyBLASTP
23178022318623822hypothetical proteinBLASTP
23188142319686873VanWQuickGO ontologyBLASTP
23197442320082339hypothetical proteinBLASTP
23202422320592351hypothetical proteinBLASTP
23206832321303621hypothetical protein
23217822322360579hypothetical protein
23223772322589213ribonuclease inhibitor barstarQuickGO ontologyBLASTP
23226742322784111hypothetical proteinBLASTP
23229462323365420hypothetical protein
232336223280924731Rhs family proteinQuickGO ontologyBLASTP
23280892328817729hypothetical proteinBLASTP
232882223308642043Rhs element Vgr proteinQuickGO ontologyBLASTP
23309962331511516Protein of unknown function DUF796QuickGO ontologyBLASTP