Pre_GI Gene

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Host: NC_011770 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011770:2499432 Pseudomonas aeruginosa LESB58, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2499432249962619550S ribosomal protein L35QuickGO ontologyBLASTP
2499650250000635750S ribosomal protein L20QuickGO ontologyBLASTP
250010425011201017phenylalanyl-tRNA synthetase alpha-subunitQuickGO ontologyBLASTP
250115525035332379phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
25035372503839303integration host factor alpha subunitQuickGO ontologyBLASTP
25039192504176258hypothetical proteinBLASTP
2504266250434277tRNA-ProQuickGO ontologyBLASTP
25048302504970141hypothetical protein
25051892505452264transposase AQuickGO ontologyBLASTP
25054852506327843insertion sequence IS407 OrfBQuickGO ontologyBLASTP
250673625088982163GTPase subunit of restriction endonuclease-likeQuickGO ontologyBLASTP
250890125104781578hypothetical protein
25111662511345180hypothetical protein
25118282512778951hypothetical proteinBLASTP
251285525138561002Phage-related protein predicted endonuclease-like proteinQuickGO ontologyBLASTP
25139342514902969hypothetical proteinBLASTP
251545925171831725hypothetical proteinBLASTP
251716425219754812hypothetical proteinBLASTP
25221732523087915transcriptional regulator-likeQuickGO ontologyBLASTP
252350725256302124hypothetical proteinBLASTP
252563025271411512hypothetical proteinBLASTP
252844825327344287hypothetical proteinBLASTP
253356225347041143hypothetical proteinBLASTP
253470125363861686protein of unknown function DUF87QuickGO ontologyBLASTP
253719725384261230serinethreonine protein kinase with TPR repeatsQuickGO ontologyBLASTP
253861325399501338phage integrase putativeQuickGO ontologyBLASTP
254039225415041113phage integrase putativeQuickGO ontologyBLASTP
25417932542125333hypothetical proteinBLASTP
25422912542821531hypothetical proteinBLASTP
25430252543819795NlpCP60 family proteinQuickGO ontologyBLASTP
25442192545061843insertion sequence IS407 OrfBQuickGO ontologyBLASTP
25450942545357264transposase AQuickGO ontologyBLASTP
25457412546067327hypothetical proteinBLASTP
254671125480181308phage minor tail protein LQuickGO ontologyBLASTP
25487592549055297hypothetical proteinBLASTP
255067625569726297hypothetical proteinBLASTP