Pre_GI: BLASTN Hits

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Query: NC_013941:1014386 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 1014386, End: 1034943, Length: 20558

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome038020BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome037110BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome014440BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome05892BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome04712BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome04460BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome04359BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome04278BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome04046BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome04018BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome03973BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome03939BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome03921BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome03881BLASTN svgBLASTP svg
AP010958:13057121305712133215626445Escherichia coli O103:H2 str. 12009 DNA, complete genome03866BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome03729BLASTN svgBLASTP svg
AP010958:14725061472506149531022805Escherichia coli O103:H2 str. 12009 DNA, complete genome03721BLASTN svgBLASTP svg
NC_002695:17946351794635181624421610Escherichia coli O157:H7 str. Sakai, complete genome02672BLASTN svgBLASTP svg
NC_002655:22647732264773228824723475Escherichia coli O157:H7 EDL933, complete genome02670BLASTN svgBLASTP svg
NC_002695:21583142158314218207123758Escherichia coli O157:H7 str. Sakai, complete genome02569BLASTN svgBLASTP svg
NC_009800:16575501657550168574228193Escherichia coli HS, complete genome02460BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome01957BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome01727BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome01330BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome0975BLASTN svgBLASTP svg
NC_011750:19313841931384195623124848Escherichia coli IAI39 chromosome, complete genome0963BLASTN svgBLASTP svg
NC_004431:13529061352906137651123606Escherichia coli CFT073, complete genome0900BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome0819BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome0815BLASTN svgBLASTP svg
NC_012917:17405421740542176692926388Pectobacterium carotovorum subsp. carotovorum PC1, complete genome0745BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome0737BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome0712BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome0712BLASTN svgBLASTP svg
NC_011750:91995391995393907219120Escherichia coli IAI39 chromosome, complete genome8e-176624BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome5e-174618BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-115422BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome6e-115422BLASTN svgBLASTP svg
NC_010473:1493983*1493983151640422422Escherichia coli str. K-12 substr. DH10B, complete genome8e-105389BLASTN svgBLASTP svg
NC_000913:1404000*1404000142700823009Escherichia coli K12, complete genome8e-105389BLASTN svgBLASTP svg
AC_000091:1407693*1407693143069823006Escherichia coli W3110 DNA, complete genome8e-105389BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str1e-97365BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome3e-95357BLASTN svgBLASTP svg
NC_013716:33278813327881336492937049Citrobacter rodentium ICC168, complete genome3e-92347BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome9e-71276BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome9e-71276BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome9e-71276BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome8e-65256BLASTN svgBLASTP svg
CP002797:4812799*4812799483159918801Escherichia coli NA114, complete genome1e-63252BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome1e-38168BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome1e-38168BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome1e-38168BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome1e-38168BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome4e-36161BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome5e-35157BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome5e-35157BLASTN svgBLASTP svg
AC_000091:24624612462461248878526325Escherichia coli W3110 DNA, complete genome9e-34153BLASTN svgBLASTP svg
NC_000913:2455037*2455037248136126325Escherichia coli K12, complete genome9e-34153BLASTN svgBLASTP svg
NC_010473:2548946*2548946258173732792Escherichia coli str. K-12 substr. DH10B, complete genome9e-34153BLASTN svgBLASTP svg
NC_007086:19365051936505197809941595Xanthomonas campestris pv. campestris str. 8004, complete genome3e-33151BLASTN svgBLASTP svg
NC_003902:29331212933121295986926749Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-33151BLASTN svgBLASTP svg
NC_010688:19080121908012196474456733Xanthomonas campestris pv. campestris, complete genome8e-31143BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome3e-30141BLASTN svgBLASTP svg
NC_011901:18608871860887191210351217Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-29139BLASTN svgBLASTP svg
NC_007508:31836313183631322068237052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-29137BLASTN svgBLASTP svg
NC_014924:936158*93615896352527368Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_015856:3675592*3675592370001824427Collimonas fungivorans Ter331 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_011750:2585015*2585015261198826974Escherichia coli IAI39 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_014831:218696*21869624079722102Thermaerobacter marianensis DSM 12885 chromosome, complete genome8e-25123BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-24121BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome3e-24121BLASTN svgBLASTP svg
NC_007946:2593500*2593500261819924700Escherichia coli UTI89, complete genome3e-24121BLASTN svgBLASTP svg
NC_008563:25658762565876258822422349Escherichia coli APEC O1, complete genome3e-24121BLASTN svgBLASTP svg
NC_011740:20721732072173211413741965Escherichia fergusonii ATCC 35469, complete genome3e-24121BLASTN svgBLASTP svg
NC_003919:3060484*3060484309971939236Xanthomonas axonopodis pv. citri str. 306, complete genome1e-23119BLASTN svgBLASTP svg
NC_002695:3189425*3189425321610426680Escherichia coli O157:H7 str. Sakai, complete genome5e-23117BLASTN svgBLASTP svg
NC_002655:3260500*3260500328246521966Escherichia coli O157:H7 EDL933, complete genome5e-23117BLASTN svgBLASTP svg
CP002516:1475521*1475521149709321573Escherichia coli KO11, complete genome7e-22113BLASTN svgBLASTP svg
CP002185:2608000*2608000263106823069Escherichia coli W, complete genome7e-22113BLASTN svgBLASTP svg
NC_008260:1044440*1044440106265118212Alcanivorax borkumensis SK2, complete genome3e-21111BLASTN svgBLASTP svg
CU928145:2655989*2655989268823232244Escherichia coli 55989 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_011748:2655989*2655989268823232244Escherichia coli 55989, complete genome5e-20107BLASTN svgBLASTP svg
NC_009800:32011532011533924219128Escherichia coli HS, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_008044:136844*13684416509628253Silicibacter sp. TM1040, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_015977:2718437*2718437274615427718Roseburia hominis A2-183 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004369:15528471552847157159918753Corynebacterium efficiens YS-314, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014039:869826*86982690861838793Propionibacterium acnes SK137 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_006085:854500*85450088927234773Propionibacterium acnes KPA171202, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007514:335085*33508535739322309Chlorobium chlorochromatii CaD3, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013530:16492141649214168158732374Xylanimonas cellulosilytica DSM 15894, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011528:1282691*1282691130313820448Coxiella burnetii CbuK_Q154, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011527:1443076*1443076146250819433Coxiella burnetii CbuG_Q212, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009727:1542000*1542000156409922100Coxiella burnetii Dugway 7E9-12, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009138:2242470*2242470227253730068Herminiimonas arsenicoxydans, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013714:1028569*1028569104859920031Bifidobacterium dentium Bd1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018868:282738*28273830817025433Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-0971.9BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0869.9BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014483:4740214*4740214476409923886Paenibacillus polymyxa E681 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:74008177400817742136920553Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007484:23927392392739241952126783Nitrosococcus oceani ATCC 19707, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013508:16874321687432172109933668Edwardsiella tarda EIB202, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012751:275336*27533629828722952Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete2e-0765.9BLASTN svgBLASTP svg
NC_013922:21108942110894213249021597Natrialba magadii ATCC 43099 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011772:5021404*5021404506359942196Bacillus cereus G9842, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:21849272184927220656121635Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:20645822064582209112726546Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:19662051966205198609919895Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:2928000*2928000295428726288Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:30596930596933285826890Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:34699834699837871931722Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:610509*61050963687526367Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:91600091600093379317794Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg
NC_014836:2848000*2848000287078522786Desulfurispirillum indicum S5 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome1e-0560BLASTN svgBLASTP svg