Pre_GI Gene

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Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:2933121 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
293312129351992079alpha-glucosidaseQuickGO ontologyBLASTP
293545729382852829TonB-dependent receptorQuickGO ontologyBLASTP
29390792940059981IS1479 transposaseQuickGO ontologyBLASTP
294038129419971617alpha-glucosidaseQuickGO ontologyBLASTP
29422342942689456ISD1 transposaseQuickGO ontologyBLASTP
29430682943211144ISD1 transposaseQuickGO ontologyBLASTP
294335829458112454VirB4 proteinQuickGO ontologyBLASTP
29459192946230312VirB3 proteinQuickGO ontologyBLASTP
29462232946627405VirB2 proteinQuickGO ontologyBLASTP
29466902947523834VirB1 proteinQuickGO ontologyBLASTP
294756929486271059VirB11 proteinQuickGO ontologyBLASTP
294862429498051182VirB10 proteinQuickGO ontologyBLASTP
29498022950569768VirB9 proteinQuickGO ontologyBLASTP
295056629516091044VirB8 proteinQuickGO ontologyBLASTP
29517202951962243hypothetical proteinBLASTP
295245929541321674VirD4 proteinQuickGO ontologyBLASTP
295498329570042022excinuclease ABC subunit BQuickGO ontologyBLASTP
29571442957695552fimbrial biogenesis proteinQuickGO ontologyBLASTP
29578762958244369type IV pilinQuickGO ontologyBLASTP
295831929598691551PilY1 proteinQuickGO ontologyBLASTP