Pre_GI Gene

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Host: NC_007705 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007705:3429493 Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome

Host Lineage: Xanthomonas oryzae; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This plant pathogen affects rice plants by causing leaf blight, a major problem in Asian countries where rice production occurs on an industrial scale. This pathogen enters the xylem and spreads throughout the vascular tissue of the plant, which results in wilting of the plant, or to leaf blight if the infection occurs later in development. Causes disease in rice. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas oryzae contains two pathovars which cause enconomically significant diseases in rice. Xanthomonas oryzae pathovar oryzicola causes bacterial streak. This disease is common in tropical area and can cause crop losses of up to 32%. Xanthomonas oryzae pathovar oryzae causes bacterial leaf blight which is one of the most serious diseases of rice. This disease is common in temperate and tropical areas and can cause significant crop loss.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
342949334313971905threonyl-tRNA synthetaseQuickGO ontologyBLASTP
34321993432414216ISXoo3 transposase orfAQuickGO ontologyBLASTP
343368934357102022excinuclease ABC subunit BQuickGO ontologyBLASTP
34365703436950381type IV pilinQuickGO ontologyBLASTP
343703234410153984PilY1 proteinQuickGO ontologyBLASTP
34409723441481510PilX proteinQuickGO ontologyBLASTP
344148534426511167hypothetical proteinBLASTP
34426483443121474pre-pilin leader sequenceQuickGO ontologyBLASTP
34431183443633516pre-pilin like leader sequenceQuickGO ontologyBLASTP
344380334451881386hypothetical proteinBLASTP
344529534484893195Oar proteinQuickGO ontologyBLASTP
34492473449846600hypothetical proteinBLASTP
34498433450586744short chain dehydrogenaseQuickGO ontologyBLASTP
34505833450903321hypothetical proteinBLASTP
34510253451603579iron superoxide dismutaseQuickGO ontologyBLASTP
345174534528901146phosphoribosylaminoimidazole carboxylase ATPase subunitQuickGO ontologyBLASTP
34528873453390504phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP