Pre_GI Gene

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Host: NC_002695 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002695:1571389 Escherichia coli O157:H7 str. Sakai, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain of O157:H7 was isolated in a 1997 outbreak in Sakai, Japan. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15713891571763375putative tail assembly chaperoneQuickGO ontologyBLASTP
15717871572068282putative phage tail proteinQuickGO ontologyBLASTP
15753571575698342putative minor tail proteinQuickGO ontologyBLASTP
15756981576396699putative minor tail proteinQuickGO ontologyBLASTP
15764131576667255putative regulatory proteinQuickGO ontologyBLASTP
15771901578068879putative antirepressor proteinQuickGO ontologyBLASTP
15781221578859738putative tail assembly proteinQuickGO ontologyBLASTP
15787571579041285putative tail assembly proteinQuickGO ontologyBLASTP
157916315815112349putative secreted effector proteinQuickGO ontologyBLASTP
158210215855033402hypothetical proteinBLASTP
15860461586951906insertion sequence 2 OrfB proteinQuickGO ontologyBLASTP
15871131587274162putative transposaseQuickGO ontologyBLASTP
15872851587584300hypothetical proteinBLASTP
15878121588087276hypothetical proteinBLASTP
158814815895091362hypothetical proteinBLASTP
15896301589842213hypothetical protein
15898731590736864spermidineputrescine ABC transporter membrane componentQuickGO ontologyBLASTP
159072015918561137putrescinespermidine ABC transporter ATPaseQuickGO ontologyBLASTP
159210615933321227peptidase TQuickGO ontologyBLASTP
159338115945021122hypothetical proteinBLASTP
159475115959801230putative integraseQuickGO ontologyBLASTP
15963451596533189putative DNA binding proteinQuickGO ontologyBLASTP
15965911597334744hypothetical proteinBLASTP
15970341597165132hypothetical proteinBLASTP
15973601597557198Icd-like proteinQuickGO ontologyBLASTP
15975501597735186hypothetical proteinBLASTP
15977351597926192hypothetical protein
15979161598158243hypothetical protein