Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:2764550 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
27645502765107558putative prophage DNA-binding proteinQuickGO ontologyBLASTP
27651002765363264putative prophage DNA binding proteinQuickGO ontologyBLASTP
27654622766157696putative phage repressor proteinQuickGO ontologyBLASTP
2766318276636851hypothetical protein
27664562766602147hypothetical protein
27666632766818156hypothetical protein
27669042767071168putative prophage membrane proteinQuickGO ontologyBLASTP
27671652767521357hypothetical proteinBLASTP
27675782768405828hypothetical proteinBLASTP
27685442769086543hypothetical proteinBLASTP
27690712769271201putative prophage exported proteinQuickGO ontologyBLASTP
27692682769594327hypothetical proteinBLASTP
27695912770322732putative prophage DNA methylaseQuickGO ontologyBLASTP
27703192770516198hypothetical protein
27705162770989474putative prophage exonucleaseQuickGO ontologyBLASTP
27711262771332207hypothetical proteinBLASTP
277129327724591167putative phage integraseQuickGO ontologyBLASTP
277246327742501788hypothetical proteinBLASTP
27743302775211882putative prophage DNA adenine methylaseQuickGO ontologyBLASTP
27755152775890376BLASTP
27760302776314285ISEc14 transposase AQuickGO ontologyBLASTP
27763562777165810ISEc14 transposase BQuickGO ontologyBLASTP
27774312778099669IS3 family transposase BQuickGO ontologyBLASTP
27781032778342240BLASTP
277899627886229627lymphocyte inhibitory factor AQuickGO ontologyBLASTP
278899227905631572ISCro1 transposase CQuickGO ontologyBLASTP
27905832790930348ISCro1 transposase BQuickGO ontologyBLASTP
27909302791607678ISCro1 transposase AQuickGO ontologyBLASTP
27918302792507678ISCro1 transposase AQuickGO ontologyBLASTP
27925072792854348ISCro1 transposase BQuickGO ontologyBLASTP
279287427944451572ISCro1 transposase CQuickGO ontologyBLASTP