Pre_GI: BLASTP Hits

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Query: NC_013716:2764550:2767165 Citrobacter rodentium ICC168, complete genome

Start: 2767165, End: 2767521, Length: 357

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:2180598:218116021811602181516357Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-60228
NC_012731:2083650:209510520951052095524420Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-58224
NC_015566:3659318:366424436642443664615372Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-49194
NC_004431:3040953:306073130607313061417687Escherichia coli CFT073, complete genomehypothetical protein1e-33141
NC_011742:2863316:286888128688812869561681Escherichia coli S88 chromosome, complete genomehypothetical protein1e-33141
NC_008563:2946391:295157029515702952250681Escherichia coli APEC O1, complete genomehypothetical protein1e-33141
NC_013361:3651150:365115036511503651743594Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-33140
NC_011750:5045927:505797450579745058522549Escherichia coli IAI39 chromosome, complete genomehypothetical protein6e-33139
NC_000913:2455037:247154224715422471988447Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; predicted protein4e-33139
AC_000091:2462461:247896624789662479412447Escherichia coli W3110 DNA, complete genomehypothetical protein4e-33139
NC_010473:2548946:256330725633072563753447Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; predicted protein4e-33139
NC_012759:2342986:235743123574312357793363Escherichia coli BW2952 chromosome, complete genomeCPS-53 (KpLE1) prophage protein9e-33138
NC_013353:2911741:291309229130922913439348Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-25113
AP010958:2911741:291309229130922913439348Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-25113
NC_017506:2089769:209982620998262100191366Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein6e-2096.3
NC_017986:4885979:489770348977034898050348Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1994.4