Pre_GI: BLASTP Hits

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Query: NC_013716:2764550:2767578 Citrobacter rodentium ICC168, complete genome

Start: 2767578, End: 2768405, Length: 828

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:2180598:218157421815742182401828Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-140497
NC_012731:2083650:209423120942312095058828Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-110398
NC_020181:5130513:516482251648225165622801Enterobacter aerogenes EA1509E, complete genomeFIG00733087: hypothetical protein1e-103376
NC_015566:3659318:366467036646703665491822Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-87321
NC_013361:3651150:365180936518093652633825Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-84310
NC_008563:2946391:295231629523162953140825Escherichia coli APEC O1, complete genomehypothetical protein9e-80296
NC_007946:2931364:293728929372892938113825Escherichia coli UTI89, complete genomehypothetical protein YfdQ9e-80296
NC_004431:3040953:306148330614833062307825Escherichia coli CFT073, complete genomeHypothetical protein yfdQ9e-80296
NC_011750:5045927:505708450570845057908825Escherichia coli IAI39 chromosome, complete genomehypothetical protein9e-80296
NC_011742:2863316:286962728696272870451825Escherichia coli S88 chromosome, complete genomehypothetical protein9e-80296
NC_010473:2548946:256381925638192564643825Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; predicted protein2e-79295
AC_000091:2462461:247947824794782480302825Escherichia coli W3110 DNA, complete genomehypothetical protein2e-79295
NC_000913:2455037:247205424720542472878825Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; predicted protein2e-79295
NC_012759:2342986:235785923578592358683825Escherichia coli BW2952 chromosome, complete genomeCPS-53 (KpLE1) prophage protein2e-79295
NC_013353:2911741:291350329135032914324822Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-74280
AP010958:2911741:291350329135032914324822Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-74280
NC_017506:2089769:210019521001952101061867Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-45182
NC_017986:4885979:489686148968614897676816Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-40164