Pre_GI: BLASTP Hits

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Query: NC_013716:2764550:2765100 Citrobacter rodentium ICC168, complete genome

Start: 2765100, End: 2765363, Length: 264

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017060:59500:102273102273102518246Rahnella aquatilis HX2 plasmid PRA1, complete sequenceprophage DNA binding protein5e-24109
NC_013282:1804909:181580218158021816059258Cronobacter turicensis, complete genomehypothetical protein1e-2098.6
NC_009436:2776410:281784428178442818056213Enterobacter sp. 638, complete genome2e-1890.9
NC_013282:1200993:121514112151411215368228Cronobacter turicensis, complete genomehypothetical protein6e-1786.3
NC_008021:879508:894299894299894517219Streptococcus pyogenes MGAS9429, complete genometranscriptional regulator, Cro/CI family6e-0649.7