Pre_GI: BLASTN Hits

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Query: CP002797:4775780 Escherichia coli NA114, complete genome

Start: 4775780, End: 4796099, Length: 20320

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome012880BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome010150BLASTN svgBLASTP svg
NC_008253:47354184735418477925943842Escherichia coli 536, complete genome010030BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome08889BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome08792BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome01683BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome01538BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome01302BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome01300BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome01237BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome01235BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence01235BLASTN svgBLASTP svg
AP010958:92293792293795098628050Escherichia coli O103:H2 str. 12009 DNA, complete genome01207BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome01140BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome01126BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome01106BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome0894BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome0886BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome0767BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome0676BLASTN svgBLASTP svg
NC_009786:43331433316409920769Escherichia coli E24377A plasmid pETEC_80, complete sequence1e-174620BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome9e-111408BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome2e-96361BLASTN svgBLASTP svg
NC_004431:27986827986832229542428Escherichia coli CFT073, complete genome1e-91345BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-86327BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome1e-79305BLASTN svgBLASTP svg
NC_010694:2492378*2492378251782925452Erwinia tasmaniensis, complete genome1e-75291BLASTN svgBLASTP svg
NC_013716:33278813327881336492937049Citrobacter rodentium ICC168, complete genome3e-64254BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome7e-53216BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome7e-53216BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome4e-48200BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence1e-26129BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-24121BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome7e-22113BLASTN svgBLASTP svg
NC_015061:1481500*1481500150744925950Rahnella sp. Y9602 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-19105BLASTN svgBLASTP svg
NC_009801:3374501*3374501339880324303Escherichia coli E24377A, complete genome2e-19105BLASTN svgBLASTP svg
NC_007384:25878762587876261159923724Shigella sonnei Ss046, complete genome7e-19103BLASTN svgBLASTP svg
CU928145:3360967*3360967340151440548Escherichia coli 55989 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011748:3360967*3360967340151440548Escherichia coli 55989, complete genome1e-1799.6BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004337:24784612478461250482826368Shigella flexneri 2a str. 301, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004741:24562972456297247959923303Shigella flexneri 2a str. 2457T, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008149:23665002366500238409917600Yersinia pestis Nepal516, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_002695:14179121417912143730119390Escherichia coli O157:H7 str. Sakai, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002655:11039911103991112782323833Escherichia coli O157:H7 EDL933, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014500:3744705*3744705376630221598Dickeya dadantii 3937 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008258:26980626980629518525380Shigella flexneri 5 str. 8401, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_007613:41197714119771413859918829Shigella boydii Sb227, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013508:2356865*2356865238859931735Edwardsiella tarda EIB202, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_020211:689451*68945171226522815Serratia marcescens WW4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_008258:401786*40178642629524510Shigella flexneri 5 str. 8401, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_004741:36682236682238968922868Shigella flexneri 2a str. 2457T, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_004337:36768736768739153023844Shigella flexneri 2a str. 301, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:1138441*1138441116841529975Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:24763342476334249822421891Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-0660BLASTN svgBLASTP svg