Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:4824541 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
482454148265081968p-hydroxybenzoic acid efflux pump subunit BQuickGO ontologyBLASTP
482657248280441473succinate-semialdehyde dehydrogenase NADPQuickGO ontologyBLASTP
48280724828344273hypothetical proteinBLASTP
483359748351681572ISCro1 transposase CQuickGO ontologyBLASTP
48351884835535348ISCro1 transposase BQuickGO ontologyBLASTP
48355354836212678ISCro1 transposase AQuickGO ontologyBLASTP
48367954837331537hypothetical proteinBLASTP
48375944837773180hypothetical protein
48379234838258336hypothetical protein
48385554839025471arginine repressorQuickGO ontologyBLASTP
48394404840378939malate dehydrogenaseQuickGO ontologyBLASTP
484047348415401068proteaseQuickGO ontologyBLASTP
484163048429971368proteaseQuickGO ontologyBLASTP
48431684843566399hypothetical protein
484376048448811122putative ATPGTP-binding proteinQuickGO ontologyBLASTP
4845045484554850450S ribosomal subunit protein L13QuickGO ontologyBLASTP
4845564484595639330S ribosomal subunit protein S9QuickGO ontologyBLASTP
48462594846897639stringent starvation protein AQuickGO ontologyBLASTP
48469034847403501stringent starvation protein BQuickGO ontologyBLASTP
48475244848306783GntR-family transcriptional regulatorQuickGO ontologyBLASTP