Pre_GI: BLASTP Hits

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Query: NC_016944:514742:532079 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 532079, End: 532204, Length: 126

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1027143:105534210553421055659318Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A4e-1580.1
NC_015633:2565753:257612025761202576464345Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase4e-1580.1
NC_016445:1363831:140978914097891410097309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A4e-1580.1
NC_016445:2938887:295416129541612954469309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase OrfAB, subunit A4e-1580.1
NC_016446:119914:135996135996136304309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetransposase OrfAB, subunit A4e-1580.1
NC_016446:49618:831208312083428309Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completetransposase OrfAB, subunit A4e-1580.1
NC_012578:1838470:188552118855211885865345Vibrio cholerae M66-2 chromosome I, complete sequenceISVch4 transposase, OrfA4e-1579.7
NC_009457:1444449:149149114914911491835345Vibrio cholerae O395 chromosome 2, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_009456:787322:799482799482799826345Vibrio cholerae O395 chromosome 1, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_009456:787322:794155794155794499345Vibrio cholerae O395 chromosome 1, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_002506:324552:358053358053358397345Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetransposase OrfAB, subunit A4e-1579.7
NC_002505:1931750:193838819383881938732345Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase OrfAB, subunit A4e-1579.7
NC_002505:238569:262326262326262670345Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetransposase OrfAB, subunit A4e-1579.7
NC_002506:370629:435419435419435763345Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetransposase OrfAB, subunit A4e-1579.7
NC_012580:353273:370503370503370847345Vibrio cholerae M66-2 chromosome II, complete sequenceISVch4 transposase, OrfB4e-1579.7
NC_012582:2013515:202291020229102023254345Vibrio cholerae O395 chromosome chromosome I, complete sequenceISVch4 transposase, OrfA4e-1579.7
NC_016945:370471:435238435238435582345Vibrio cholerae IEC224 chromosome II, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_016945:324519:357871357871358215345Vibrio cholerae IEC224 chromosome II, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_016944:238580:262337262337262681345Vibrio cholerae IEC224 chromosome I, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_016944:1978058:198469619846961985040345Vibrio cholerae IEC224 chromosome I, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_012668:1688500:170877517087751709119345Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase OrfAB subunit A4e-1579.7
NC_012667:931390:100332310033231003667345Vibrio cholerae MJ-1236 chromosome 2, complete genometransposase OrfAB subunit A4e-1579.7
NC_012667:931390:931390931390931734345Vibrio cholerae MJ-1236 chromosome 2, complete genometransposase OrfAB subunit A4e-1579.7
NC_012583:440420:464116464116464460345Vibrio cholerae O395 chromosome chromosome II, complete sequenceISVch4 transposase, OrfA4e-1579.7
NC_017270:220282:245474245474245659186Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein8e-1579
NC_011566:4709672:471941947194194719727309Shewanella piezotolerans WP3, complete genomeISSwp4, transposase OrfA2e-1374.7
NC_008345:3756977:376294237629423763253312Shewanella frigidimarina NCIMB 400, complete genometransposase IS3/IS911 family protein2e-1270.9
NC_009997:2699644:270561127056112705922312Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein2e-1270.9
NC_009997:5188221:521562552156255215936312Shewanella baltica OS195, complete genometransposase IS3/IS911 family protein2e-1270.9
NC_009999:38832:613386133861649312Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase IS3/IS911 family protein2e-1270.9
NC_011415:4767892:478541247854124785744333Escherichia coli SE11 chromosome, complete genometransposase5e-1269.7
NC_015963:117178:146644146644146946303Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetransposase IS3/IS911 family protein8e-1268.9
NC_012214:1355500:136826213682621368564303Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf A8e-1268.9
NC_012214:1212616:122310512231051223407303Erwinia pyrifoliae Ep1/96, complete genometransposase, orf A8e-1268.9
NC_012214:1117325:112660611266061126908303Erwinia pyrifoliae Ep1/96, complete genometransposase8e-1268.9
NC_012214:2805297:281743728174372817739303Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable fragment8e-1268.9
NC_010694:1052722:107302010730201073358339Erwinia tasmaniensis, complete genomeTransposase insN for insertion sequence element IS9118e-1268.9
NC_009783:1665610:168667616866761686987312Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein8e-1268.9
NC_004741:2456297:245629724562972456599303Shigella flexneri 2a str. 2457T, complete genomeIS911 orfA1e-1168.6
NC_004741:4364235:438579143857914386093303Shigella flexneri 2a str. 2457T, complete genomeIS911 orfA1e-1168.6
NC_004337:2478461:247817824781782478480303Shigella flexneri 2a str. 301, complete genomeIS911 ORF11e-1168.6
NC_008258:1873805:187703318770331877335303Shigella flexneri 5 str. 8401, complete genomeIS911 ORF11e-1168.6
NC_017319:192482:217234217234217536303Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS911 ORF11e-1168.6
NC_014618:1452927:146163514616351461937303Enterobacter cloacae SCF1 chromosome, complete genometransposase IS3/IS911 family protein1e-1168.6
NC_008253:3941938:397827739782773978579303Escherichia coli 536, complete genomeputative transposase2e-1168.2
NC_008253:3122148:315522931552293155531303Escherichia coli 536, complete genomeprobable transposase protein2e-1168.2
NC_008253:2828573:284248828424882842790303Escherichia coli 536, complete genomeputative transposase2e-1168.2
NC_011740:2859933:286655528665552866893339Escherichia fergusonii ATCC 35469, complete genome1e-1168.2
NC_006905:2857699:286167128616712862009339Salmonella enterica subsp. enterica serovar Choleraesuis strTransposase insN for insertion sequence element IS1e-1168.2
NC_004337:4374500:439355943935594393897339Shigella flexneri 2a str. 301, complete genomeIS911 ORF11e-1168.2
NC_004851:191709:216790216790217128339Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS911 ORF11e-1168.2
NC_014121:3627588:366667736666773666979303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-1168.2
NC_014121:4299500:432301043230104323312303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-1168.2
NC_014121:2330451:233852223385222338824303Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS911 transposase orfB1e-1168.2
NC_014121:489500:516355516355516564210Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeIS911 orfB2e-1167.8
NC_012125:2826624:284367028436702843879210Salmonella enterica subsp. enterica serovar Paratyphi C strainTransposase insN for insertion sequence element IS2e-1167.8
NC_014800:329861:352451352451352774324Pseudoalteromonas sp. SM9913 chromosome chromosome II, completetransposase IS3/IS911 family protein3e-1167.4
NC_007606:1209132:121876512187651219067303Shigella dysenteriae Sd197, complete genomeIS911 ORF14e-1166.6
NC_016822:1431200:147404114740411474343303Shigella sonnei 53G, complete genomeIS911 orf14e-1166.6
NC_010658:2529033:253361025336102533912303Shigella boydii CDC 3083-94, complete genomeIS911, transposase orfA4e-1166.6
NC_010660:33109:415224152241824303Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS911, transposase orfA4e-1166.6
NC_007608:97092:121915121915122253339Shigella boydii Sb227 plasmid pSB4_227, complete sequenceIS911 ORF15e-1166.6
NC_013971:73037:874338743387867435Erwinia amylovora ATCC 49946 chromosome, complete genometransposase9e-1165.5
NC_014306:3102000:310975731097573110068312Erwinia billingiae Eb661, complete genomeTransposase OrfAB, subunit A9e-1165.5
NC_011745:2209288:227555222755522275677126Escherichia coli ED1a chromosome, complete genometransposase ORF A, IS911 (fragment)2e-1064.3
NC_013941:4470932:447228444722844472631348Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1063.5
NC_013941:1613595:161801916180191618366348Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1063.5
NC_010498:1094000:111515511151551115466312Escherichia coli SMS-3-5, complete genomeIS911 transposase orfA3e-1063.5
NC_008253:4735418:475703447570344757369336Escherichia coli 536, complete genomeprobable transposase protein7e-1062.8
NC_020063:4127161:413226041322604132571312Enterobacteriaceae bacterium strain FGI 57, complete genometransposase1e-0962
AP010958:3669500:371511937151193715466348Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted IS602 transposase OrfA3e-0960.8
NC_013353:3669500:371511937151193715466348Escherichia coli O103:H2 str. 12009, complete genomeIS602 transposase OrfA3e-0960.8
NC_012967:3769499:378592037859203786267348Escherichia coli B str. REL606 chromosome, complete genometransposase3e-0960.8
NC_011748:2973968:299168929916892992036348Escherichia coli 55989, complete genometransposase ORF A, IS3 family2e-0960.8
CU928145:2973968:299168929916892992036348Escherichia coli 55989 chromosome, complete genometransposase ORF A, IS3 family2e-0960.8
NC_011415:1472500:149204614920461492393348Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-0960.8
NC_013364:3701895:375685437568543757201348Escherichia coli O111:H- str. 11128, complete genomeputative IS602 transposase OrfA2e-0960.8
NC_010488:48868:673566735667667312Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequencehypothetical protein2e-0960.8
NC_012947:44512:582065820658517312Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS3/IS911 family protein2e-0960.8
NC_010498:301000:314956314956315267312Escherichia coli SMS-3-5, complete genomeIS911 transposase orfA9e-0958.9
NC_011750:1094000:109738510973851097732348Escherichia coli IAI39 chromosome, complete genometransposase ORF A, IS3 family1e-0858.9
NC_008739:41793:596425964259947306Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencetransposase IS3/IS911 family protein2e-0857.4
NC_008740:443274:462564462564462869306Marinobacter aquaeolei VT8, complete genometransposase IS3/IS911 family protein2e-0857.4
NC_004459:349500:367974367974368270297Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transposase8e-0855.8
NC_016614:1543333:155484115548411555152312Vibrio sp. EJY3 chromosome 2, complete sequencetransposase IS3/IS911 family protein4e-0650.1
NC_009656:6224221:623073762307376231045309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-0649.3
NC_009434:2006500:201519820151982015506309Pseudomonas stutzeri A1501, complete genometransposase8e-0649.3