Pre_GI: BLASTP Hits

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Query: NC_015848:2859145:2861559 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2861559, End: 2865467, Length: 3909

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:2830682:2833096283309628369803885Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, PE-PGRS family protein3e-26122
NC_016804:2735897:2738974273897427405571584Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE-PGRS family protein8e-23110
NC_008769:2754828:2759609275960927611921584Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein8e-23110
NC_012207:2747599:2752380275238027539631584Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein8e-23110
NC_017026:2786000:2788929278892927910132085Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein2e-22109
NC_019950:2830682:2830682283068228327662085Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, PE-PGRS family protein1e-22109
NC_015848:2859145:2859145285914528612292085Mycobacterium canettii CIPT 140010059, complete genomePE-PGRS family protein1e-22109
NC_009525:2802987:2807269280726928093532085Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein1e-22109
NC_002755:2788000:2790789279078927928732085Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein1e-22109
NC_000962:2791019:2795301279530127973852085Mycobacterium tuberculosis H37Rv, complete genomePE-PGRS FAMILY PROTEIN1e-22109
NC_002755:2788000:2796742279674228017394998Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein1e-22109
NC_009565:2806000:2809407280940728107021296Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein1e-22109
NC_002945:2757821:276356627635662764186621Mycobacterium bovis AF2122/97, complete genomehypothetical protein3e-22108
NC_015848:2859145:2869315286931528742974983Mycobacterium canettii CIPT 140010059, complete genomePE-PGRS family protein3e-1998.6
NC_019950:2830682:2840852284085228458344983Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, PE-PGRS family protein PE_PGRS544e-1997.8
NC_000962:2791019:2801254280125428062364983Mycobacterium tuberculosis H37Rv, complete genomePE-PGRS FAMILY PROTEIN6e-1997.4
NC_009525:2802987:2813222281322228182044983Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein6e-1997.4
NC_016804:2735897:2747970274797027493971428Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE-PGRS family protein8e-1997.1
NC_012207:2747599:2761378276137827628051428Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein8e-1997.1
NC_008769:2754828:2768605276860527700321428Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein8e-1997.1
NC_002945:2757821:2771504277150427730331530Mycobacterium bovis AF2122/97, complete genomehypothetical protein1e-1896.3
NC_009565:2806000:281872728187272819545819Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein3e-1895.1
NC_015848:1647523:1659310165931016623303021Mycobacterium canettii CIPT 140010059, complete genomePE-PGRS family protein5e-1687.8
NC_009565:1629780:1640600164060016428132214Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein3e-1585.1
NC_016768:2764000:2771960277196027741762217Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein8e-1584
NC_010612:6113155:6120939612093961252944356Mycobacterium marinum M, complete genomePE-PGRS family protein9e-1583.6
NC_002945:1621765:1632588163258816349752388Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein8e-1583.6
NC_016768:2764000:2775550277555027797764227Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-1483.2
NC_002945:1621765:1626985162698516312114227Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein2e-1482.8
NC_009565:1629780:1635000163500016392234224Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein3e-1481.6
NC_002755:3773734:3792396379239637947232328Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein2e-1379.3
NC_020133:942375:9423759423759441201746Mycobacterium liflandii 128FXT, complete genomePE-PGRS family protein5e-1377.8
NC_009525:3794000:3810776381077638125241749Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein2e-1275.5
NC_016768:3774105:3792899379289937950942196Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePE-PGRS family protein3e-1275.5
NC_012943:3777371:3796165379616537983602196Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein3e-1275.5
NC_000962:3781501:3801653380165338038482196Mycobacterium tuberculosis H37Rv, complete genomePE-PGRS FAMILY PROTEIN3e-1275.5
NC_016804:3753243:3767225376722537694772253Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE PGRS family protein4e-1275.1
NC_002945:3735141:3753936375393637561852250Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein4e-1275.1
NC_008769:3769065:3787860378786037901122253Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein4e-1275.1
NC_012207:3766978:3785773378577337880252253Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein4e-1275.1
NC_017026:3754000:377091037709103771389480Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein4e-1275.1
NC_009565:3793976:3812770381277038149652196Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein4e-1274.7
NC_009525:3933567:3939682393968239443194638Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein9e-1273.6
NC_017026:3894000:3915130391513039161881059Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein3e-1172
NC_009525:3933567:3949108394910839512612154Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein3e-1171.6
NC_009525:3933567:3955294395529439589293636Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein4e-1171.6
NC_020133:5020500:5028630502863050313532724Mycobacterium liflandii 128FXT, complete genomePE-PGRS family protein9e-1170.5
NC_010612:5403000:5410995541099554137272733Mycobacterium marinum M, complete genomePE-PGRS family protein8e-1170.5
NC_020133:4841932:4857957485795748599241968Mycobacterium liflandii 128FXT, complete genomePE-PGRS family protein7e-1067.4
NC_016768:3296478:3315569331556933183702802Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-0966.6
NC_012943:3299744:3318835331883533216362802Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein1e-0966.6
NC_002755:1095105:1095105109510510965351431Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein2e-0965.9
NC_010612:5403000:5408042540804254107742733Mycobacterium marinum M, complete genomePE-PGRS family protein, PE_PGRS9_33e-0965.5
NC_015848:1647523:1653707165370716579334227Mycobacterium canettii CIPT 140010059, complete genomePE-PGRS family protein8e-0963.9
NC_016768:3296478:3312205331220533136231419Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-0862.4
NC_000962:1095078:1095078109507810964511374Mycobacterium tuberculosis H37Rv, complete genomePE-PGRS FAMILY PROTEIN4e-0861.6
NC_009525:1096386:1096386109638610977591374Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein4e-0861.6
NC_010612:6385520:6388395638839563956937299Mycobacterium marinum M, complete genomePE-PGRS family protein4e-0861.6
NC_012207:1097228:1097228109722810986011374Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein4e-0861.6
NC_008769:1125567:1125567112556711269401374Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein4e-0861.6
NC_016804:1095846:1095846109584610972191374Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE-PGRS family protein4e-0861.6
NC_002945:1095337:1095529109552910969021374Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein4e-0861.6
NC_017026:3894000:3900446390044639021281683Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein5e-0861.2
NC_012943:3299744:3317611331761133186181008Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein5e-0861.2
NC_016768:3296478:3314345331434533153521008Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePE-PGRS family protein5e-0861.2
NC_012943:3299744:3315516331551633168891374Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein1e-0760.1
NC_009565:1098847:1098847109884711002201374Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein1e-0760.1
NC_010612:5626259:5639613563961356433683756Mycobacterium marinum M, complete genomePE-PGRS family protein2e-0759.3
NC_020133:5020500:503853150385315039034504Mycobacterium liflandii 128FXT, complete genome3e-0758.9
NC_012207:831030:834815834815835333519Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein4e-0758.2
NC_009565:833076:836859836859837377519Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein4e-0758.2
NC_008769:860670:864455864455864973519Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein4e-0758.2
NC_002755:831397:835179835179835697519Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein4e-0758.2
NC_002945:831029:834814834814835332519Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein4e-0758.2
NC_009525:830513:834296834296834814519Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein4e-0758.2
NC_012943:830000:833990833990834508519Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein4e-0758.2
NC_016768:830000:833994833994834512519Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein4e-0758.2
NC_016804:831500:834734834734835252519Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE PGRS family protein4e-0758.2
NC_017026:829444:833487833487834005519Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein4e-0758.2
NC_017026:3894000:3909070390907039103891320Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein1e-0657
NC_020133:1443934:1451027145102714522381212Mycobacterium liflandii 128FXT, complete genomePE-PGRS family protein2e-0656.2
NC_010612:5403000:5418899541889954214122514Mycobacterium marinum M, complete genomePE-PGRS family protein5e-0654.7
NC_010612:5301135:5307272530727253131965925Mycobacterium marinum M, complete genomePE-PGRS family protein9e-0653.9