Pre_GI Gene

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Host: NC_010612 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010612:5626259 Mycobacterium marinum M, complete genome

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
56262595626588330conserved hypothetical secreted proteinQuickGO ontology
562670556277661062hypothetical proteinBLASTP
56277945628612819conserved hypothetical oxidoreductaseQuickGO ontologyBLASTP
5628641562871676tRNA-ArgQuickGO ontology
56287945629075282hypothetical protein
562908856305211434hypothetical proteinBLASTP
56307025631331630hypothetical proteinBLASTP
56313285631747420hypothetical proteinBLASTP
56326465633002357transposaseQuickGO ontologyBLASTP
56339455634241297transposaseQuickGO ontologyBLASTP
56344685635451984hypothetical protein
56354565635914459hypothetical protein
56365485636829282transposase ISMyma01_aa1QuickGO ontologyBLASTP
56368715637665795transposase ISMyma01_aa2QuickGO ontologyBLASTP
56379765638149174hypothetical protein
56383065639169864hypothetical proteinBLASTP
563961356433683756PE-PGRS family proteinQuickGO ontologyBLASTP
56433535643865513hypothetical protein
56439395644520582transposaseQuickGO ontologyBLASTP
56443635644866504hypothetical protein