Pre_GI: BLASTP Hits

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Query: NC_009495:3832500:3864003 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 3864003, End: 3865922, Length: 1920

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009698:3706154:3737647373764737395661920Clostridium botulinum A str. Hall chromosome, complete genomeATP-dependent protease01207
NC_017297:3939328:3970173397017339720921920Clostridium botulinum F str. 230613 chromosome, complete genomeATP-dependent protease01187
NC_010516:3903867:3935360393536039372791920Clostridium botulinum B1 str. Okra, complete genomeATP-dependent protease01187
NC_009699:3940984:3972478397247839743971920Clostridium botulinum F str. Langeland chromosome, complete genomeATP-dependent protease01186
NC_010520:3938490:3970010397001039719291920Clostridium botulinum A3 str. Loch Maree, complete genomeATP-dependent protease01181
NC_009706:3882500:3942915394291539448101896Clostridium kluyveri DSM 555 chromosome, complete genomeLa-related protease0884
NC_011837:3814000:3874418387441838763131896Clostridium kluyveri NBRC 12016, complete genomehypothetical protein0884
NC_017295:3901773:3920780392078039226841905Clostridium acetobutylicum EA 2018 chromosome, complete genomeLon-like ATP-dependent protease0851
NC_003030:3902000:3921429392142939233331905Clostridium acetobutylicum ATCC 824, complete genomeLon-like ATP-dependent protease0851
NC_015687:3907000:3923011392301139249151905Clostridium acetobutylicum DSM 1731 chromosome, complete genomeLon-like ATP-dependent protease0851
NC_009697:3409185:3414401341440134160801680Clostridium botulinum A str. ATCC 19397 chromosome, completeATP-dependent protease LonB4e-117422
NC_009012:3224000:3235055323505532367311677Clostridium thermocellum ATCC 27405, complete genomeEndopeptidase La7e-112405
NC_014622:4361553:4383896438389643858001905Paenibacillus polymyxa SC2 chromosome, complete genomeATP-dependent protease la2e-105383
NC_016584:5420823:5437417543741754391651749Desulfosporosinus orientis DSM 765 chromosome, complete genomeATP-dependent protease LonB8e-104378
NC_012472:4255729:4284072428407242857451674Bacillus cereus 03BB102, complete genomeATP-dependent protease LonB1e-102374
NC_003997:4273579:4279340427934042810131674Bacillus anthracis str. Ames, complete genomeATP-dependent protease LA1e-102374
NC_008600:4263505:4285671428567142873441674Bacillus thuringiensis str. Al Hakam, complete genomeATP-dependent protease LA1e-102374
NC_012659:4273606:4279367427936742810401674Bacillus anthracis str. A0248, complete genomeATP-dependent protease LonB1e-102374
NC_014335:4181710:4210057421005742117301674Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent protease LA1e-102374
NC_011969:4140000:4167251416725141689241674Bacillus cereus Q1 chromosome, complete genomeATP-dependent protease la2e-102373
NC_017208:4435573:4454817445481744564871671Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent protease La2e-101370
NC_004722:4405363:4425240442524044269101671Bacillus cereus ATCC 14579, complete genomeATP-dependent protease La1e-101370
NC_014171:4317520:4340149434014943418191671Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent protease La1e-101370
NC_015474:983468:9918469918469938161971Pyrococcus sp. NA2 chromosome, complete genomeATP-dependent protease Lon1e-32141
NC_005213:202400:3063353063353081371803Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-31139
NC_005213:295994:3063353063353081371803Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-31139
NC_000961:372000:4126274126274160103384Pyrococcus horikoshii OT3, complete genomeATP-dependent protease La5e-31136
NC_015320:967701:9832969832969851791884Archaeoglobus veneficus SNP6 chromosome, complete genomeSigma 54 interacting domain-containing protein2e-27124
NC_003552:4054908:4057563405756340596952133Methanosarcina acetivorans C2A, complete genomeendopeptidase La2e-25117
NC_013517:2437574:2443102244310224454112310Sebaldella termitidis ATCC 33386, complete genomeATP-dependent protease La8e-25115
NC_008601:1094041:1113543111354311158672325Francisella tularensis subsp. novicida U112, complete genomeDNA-binding, ATP-dependent protease La3e-24114
NC_006055:456711:4721614721614745242364Mesoplasma florum L1, complete genomeclass III heat shock DNA-binding ATP dependent Lon protease2e-24114
NC_013407:1177731:1195976119597611979521977Methanocaldococcus vulcanius M7, complete genomepeptidase S16, Lon-like protease2e-24114
NC_015222:2475792:2481268248126824836822415Nitrosomonas sp. AL212 chromosome, complete genomeanti-sigma H sporulation factor, LonB8e-24112
NC_008710:621822:6440016440016464362436Borrelia turicatae 91E135, complete genomeATP-dependent protease La8e-24112
NC_002927:2338549:2385039238503923874922454Bordetella bronchiseptica RB50, complete genomeATP-dependent protease La2e-23111
NC_017256:515579:5228985228985252552358Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,ATP-dependent protease LA5e-23110
NC_008570:2216736:2216736221673622190902355Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeATP-dependent protease La3e-23110
NC_012438:192065:2088392088392112202382Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent protease La3e-23110
NC_016513:1761830:1779921177992117823382418Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeATP-dependent protease La3e-23110
NC_013416:1429881:1445639144563914480562418Aggregatibacter actinomycetemcomitans D11S-1, complete genomeATP-dependent protease La3e-23110
NC_017253:509494:5230065230065253392334Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,ATP-dependent protease LA2e-23110
NC_002528:505951:5221045221045244372334Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeATP-dependent protease LA2e-23110
NC_016751:1604048:1607105160710516094652361Marinitoga piezophila KA3 chromosome, complete genomeATP-dependent protease La2e-23110
NC_016632:1049510:1059119105911910614762358Serratia symbiotica str. 'Cinara cedri' chromosome, completeDNA-binding ATP-dependent protease La, heat shock K-protein6e-23109
NC_010524:2761394:2770631277063127730482418Leptothrix cholodnii SP-6, complete genomeATP-dependent protease La6e-23109
NC_017259:480656:5008895008895032372349Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,ATP-dependent protease LA2e-22108
NC_020134:2832857:2840801284080128432302430Clostridium stercorarium subsp. stercorarium DSM 8532, completeATP-dependent protease LonA2e-22108
NC_011992:1179084:1187297118729711897172421Acidovorax ebreus TPSY, complete genomeATP-dependent protease La1e-22108
NC_008782:1277117:1285330128533012877502421Acidovorax sp. JS42, complete genomeATP-dependent protease La1e-22108
NC_007205:841818:8467228467228491062385Candidatus Pelagibacter ubique HTCC1062, complete genomeATP-dependent protease La1e-22108
NC_017062:547317:5538615538615562152355Rickettsia typhi str. B9991CWPP chromosome, complete genomeATP-dependent protease La9e-23108
NC_007484:1823751:1865508186550818679462439Nitrosococcus oceani ATCC 19707, complete genomePeptidase S16, ATP-dependent protease La4e-22107
NC_014622:4361553:4381449438144943837852337Paenibacillus polymyxa SC2 chromosome, complete genomeATP-dependent protease la2e-21104
NC_011959:972798:9859669859669884642499Thermomicrobium roseum DSM 5159, complete genomeATP-dependent protease La2e-21104
NC_010644:517211:5194595194595219512493Elusimicrobium minutum Pei191, complete genomeATP-dependent protease La2e-21104
NC_015731:3077842:3077842307784230802172376Nitrosomonas sp. Is79A3 chromosome, complete genomeanti-sigma H sporulation factor, LonB2e-21104
NC_007760:3848190:3855535385553538579732439Anaeromyxobacter dehalogenans 2CP-C, complete genomeATP-dependent protease La5e-21103
NC_015731:2039317:2069473206947320718842412Nitrosomonas sp. Is79A3 chromosome, complete genomeanti-sigma H sporulation factor, LonB3e-21103
NC_007110:1:2381323813262602448Rickettsia felis URRWXCal2 plasmid pRF, complete sequenceATP-dependent protease La, bacterial type3e-21103
NC_002947:2589951:2630533263053326329292397Pseudomonas putida KT2440, complete genomeATP-dependent protease La1e-20102
NC_007759:1571425:1581954158195415843922439Syntrophus aciditrophicus SB, complete genomeATP-dependent protease La1e-20101
NC_004578:4204235:4204235420423542066312397Pseudomonas syringae pv. tomato str. DC3000, complete genomeATP-dependent protease La2e-20101
NC_004129:4596040:4601803460180346041992397Pseudomonas fluorescens Pf-5, complete genomeATP-dependent protease La2e-20101
NC_021150:2348214:2362175236217523645682394Azotobacter vinelandii CA6, complete genomePeptidase S16, ATP-dependent protease2e-20101
NC_012560:2348202:2362163236216323645562394Azotobacter vinelandii DJ, complete genomePeptidase S16, ATP-dependent protease2e-20101
NC_008025:430487:4361534361534386152463Deinococcus geothermalis DSM 11300, complete genomeATP-dependent protease La4e-20100
NC_007517:2870657:2885715288571528880392325Geobacter metallireducens GS-15, complete genomePeptidase S16, ATP-dependent protease La4e-20100
NC_018643:482676:4885824885824909602379Alpha proteobacterium HIMB5 chromosome, complete genomeATP-dependent proteinase3e-20100
NC_014539:1839840:1839840183984018422632424Burkholderia sp. CCGE1003 chromosome 1, complete sequenceATP-dependent protease La5e-2099.8
NC_020126:2883194:2902238290223829046912454Myxococcus stipitatus DSM 14675, complete genomeATP-dependent protease La6e-2099.8
NC_002488:1099975:1139789113978911423352547Xylella fastidiosa 9a5c, complete genomeATP-dependent serine proteinase La6e-2099.8
NC_008702:2259430:2269613226961322719972385Azoarcus sp. BH72, complete genomeATP-dependent protease La7e-2099.8
NC_016584:5420823:5434918543491854373382421Desulfosporosinus orientis DSM 765 chromosome, complete genomeATP-dependent protease La1e-1999
NC_015510:4113505:4126219412621941286212403Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeanti-sigma H sporulation factor, LonB1e-1998.6
NC_009483:2201986:2220209222020922226352427Geobacter uraniireducens Rf4 chromosome, complete genomeATP-dependent protease La1e-1998.6
NC_013315:3689422:3693315369331536956842370Clostridium difficile CD196 chromosome, complete genomeATP-dependent protease La1e-1998.6
NC_014960:2059012:2059012205901220615312520Anaerolinea thermophila UNI-1, complete genomeATP-dependent protease La2e-1998.2
NC_013171:416279:4250344250344273642331Anaerococcus prevotii DSM 20548, complete genomeATP-dependent protease La3e-1997.4
NC_012108:1067876:1096881109688110992772397Desulfobacterium autotrophicum HRM2, complete genomeLon23e-1997.4
NC_007645:2204066:2212772221277222152042433Hahella chejuensis KCTC 2396, complete genomeATP-dependent protease La3e-1997.4
NC_014624:2549219:2553144255314425555312388Eubacterium limosum KIST612 chromosome, complete genomeendopeptidase La5e-1996.7
NC_007517:2055305:2084434208443420868512418Geobacter metallireducens GS-15, complete genomePeptidase S16, ATP-dependent protease La6e-1996.3
NC_019970:813917:8181028181028204502349Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeATP-dependent protease La7e-1996.3
NC_014774:1120383:1153046115304611555082463Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeATP-dependent protease La1e-1895.5
NC_002937:1395977:1413261141326114157262466Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeATP-dependent protease La1e-1895.1
NC_013522:991649:9949549949549972992346Thermanaerovibrio acidaminovorans DSM 6589, complete genomeATP-dependent protease La1e-1895.1
NC_010995:2312901:2319663231966323220802418Cellvibrio japonicus Ueda107, complete genomeATP-dependent protease La2e-1894.4
NC_010001:473354:4823734823734848022430Clostridium phytofermentans ISDg, complete genomeATP-dependent protease La3e-1894.4
NC_010172:2722000:2723728272372827261482421Methylobacterium extorquens PA1, complete genomeATP-dependent protease La4e-1893.6
NC_016148:1105669:1124394112439411267932400Thermovirga lienii DSM 17291 chromosome, complete genomeATP-dependent proteinase6e-1893.2
NC_000919:545141:5646525646525672972646Treponema pallidum subsp. pallidum str. Nichols, complete genomeATP-dependent protease LA (lon-2)9e-1892.4
NC_010741:546573:5660845660845687292646Treponema pallidum subsp. pallidum SS14, complete genomeATP-dependent protease LA9e-1892.4
NC_016842:546661:5661735661735688182646Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeS16 family endopeptidase La9e-1892.4
NC_016843:547149:5666615666615693062646Treponema pallidum subsp. pertenue str. Gauthier chromosome,S16 family endopeptidase La9e-1892.4
NC_016844:547069:5665815665815692262646Treponema pallidum subsp. pallidum DAL-1 chromosome, completeS16 family endopeptidase La9e-1892.4
NC_016848:547115:5666275666275692722646Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeS16 family endopeptidase La9e-1892.4
NC_017268:546376:5658885658885685332646Treponema pallidum subsp. pallidum str. Chicago chromosome,ATP-dependent protease La9e-1892.4
NC_021508:546592:5661045661045687492646Treponema pallidum subsp. pallidum SS14, complete genomeS16 family endopeptidase La9e-1892.4
NC_009634:547995:5492005492005512572058Methanococcus vannielii SB chromosome, complete genomepeptidase S16, Lon-like protease8e-1892.4
NC_015714:542679:5621975621975648422646Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeS16 family endopeptidase La1e-1792
NC_007797:1016456:1027778102777810301862409Anaplasma phagocytophilum HZ, complete genomeATP-dependent protease La1e-1792
NC_009697:3409185:3411942341194234142632322Clostridium botulinum A str. ATCC 19397 chromosome, completeATP-dependent protease La2e-1791.7
NC_009637:438037:4380374380374401152079Methanococcus maripaludis C7 chromosome, complete genomepeptidase S16, Lon-like protease2e-1791.7
NC_019673:7797666:7799795779979578021432349Saccharothrix espanaensis DSM 44229 complete genomeLon protease2e-1791.3
NC_007298:1824335:1842675184267518450892415Dechloromonas aromatica RCB, complete genomePeptidase S16, ATP-dependent protease La3e-1790.9
NC_009975:1374500:1392058139205813941392082Methanococcus maripaludis C6, complete genomepeptidase S16, Lon-like protease3e-1790.9
NC_011979:2892119:2900228290022829026572430Geobacter sp. FRC-32, complete genomeATP-dependent protease La4e-1790.5
NC_012472:4255729:4281558428155842838882331Bacillus cereus 03BB102, complete genomeATP-dependent protease La 14e-1790.5
NC_011773:4296082:4314526431452643168562331Bacillus cereus AH820 chromosome, complete genomeATP-dependent protease La 14e-1790.5
NC_016779:4217171:4234404423440442367342331Bacillus cereus F837/76 chromosome, complete genomeATP-dependent protease La4e-1790.5
NC_011979:646518:6465186465186489202403Geobacter sp. FRC-32, complete genomeATP-dependent protease La4e-1790.5
NC_014171:4317520:4337636433763643398342199Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent protease La5e-1790.1
NC_011772:4397599:4415041441504144173712331Bacillus cereus G9842, complete genomeATP-dependent protease La 15e-1790.1
NC_008600:4263505:4283157428315742855412385Bacillus thuringiensis str. Al Hakam, complete genomeATP-dependent protease La 15e-1790.1
NC_017208:4435573:4452304445230444546342331Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent protease La4e-1790.1
NC_004722:4405363:4422727442272744250572331Bacillus cereus ATCC 14579, complete genomeATP-dependent protease La4e-1790.1
NC_011725:4428726:4447392444739244497222331Bacillus cereus B4264 chromosome, complete genomeATP-dependent protease La 14e-1790.1
NC_003997:4273579:4276826427682642791472322Bacillus anthracis str. Ames, complete genomeATP-dependent protease La 14e-1790.1
NC_012659:4273606:4276853427685342791832331Bacillus anthracis str. A0248, complete genomeendopeptidase LA4e-1790.1
NC_014335:4181710:4207543420754342098642322Bacillus cereus biovar anthracis str. CI chromosome, completeendopeptidase La4e-1790.1
NC_003909:4209385:4230095423009542324162322Bacillus cereus ATCC 10987, complete genomeATP-dependent protease La 14e-1790.1
NC_011969:4140000:4164738416473841670592322Bacillus cereus Q1 chromosome, complete genomeendopeptidase la (ATP-dependent protease la 1)7e-1789.4
NC_002939:1926084:1954021195402119564442424Geobacter sulfurreducens PCA, complete genomeATP-dependent protease La1e-1688.6
NC_009485:8138314:8180940818094081833002361Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-binding ATP-dependent protease La2e-1688.2
NC_015155:347231:3506753506753531192445Mycoplasma suis str. Illinois chromosome, complete genomeATP-dependent protease La2e-1687.8
NC_009051:72980:9015290152925332382Methanoculleus marisnigri JR1, complete genomeATP-dependent protease La2e-1687.8
NC_017098:1278712:1306987130698713093652379Spirochaeta africana DSM 8902 chromosome, complete genomeATP-dependent protease La4e-1687
NC_014376:2766326:2766326276632627687462421Clostridium saccharolyticum WM1 chromosome, complete genomeATP-dependent protease La4e-1687
NC_014532:3036109:3036109303610930385442436Halomonas elongata DSM 2581, complete genomeATP-dependent protease La5e-1686.7
NC_008278:1876435:1892923189292318955472625Frankia alni ACN14a, complete genomeDNA-binding ATP-dependent protease La; heat shock K-protein5e-1686.7
NC_009617:1487110:1487110148711014894972388Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeATP-dependent protease La7e-1686.3
NC_013740:571879:5950555950555973732319Acidaminococcus fermentans DSM 20731, complete genomeATP-dependent protease La7e-1686.3
NC_020126:4974877:4997679499767950001682490Myxococcus stipitatus DSM 14675, complete genomeATP-dependent protease La1e-1585.9
NC_015711:6796082:6800076680007668025592484Myxococcus fulvus HW-1 chromosome, complete genomeATP-dependent protease La9e-1685.9
NC_008095:4858117:4862103486210348645862484Myxococcus xanthus DK 1622, complete genomeATP-dependent protease La1e-1585.5
NC_009135:330628:3682843682843703622079Methanococcus maripaludis C5, complete genomepeptidase S16, Lon-like protease1e-1585.5
NC_011832:2668337:2689194268919426915782385Candidatus Methanosphaerula palustris E1-9c, complete genomeATP-dependent protease La3e-1584.3
NC_007796:1731500:1762017176201717644102394Methanospirillum hungatei JF-1, complete genomeATP-dependent protease La3e-1584
NC_015578:1582827:1582827158282715853162490Treponema primitia ZAS-2 chromosome, complete genomeendopeptidase La3e-1584
NC_019970:813917:817168817168818031864Thermoanaerobacterium thermosaccharolyticum M0795, complete genomesigma-54 interacting regulator7e-1582.8
NC_013890:53538:6248562485645272043Dehalococcoides sp. GT chromosome, complete genomeEndopeptidase La7e-1582.8
NC_021182:4310900:4324338432433843267222385Clostridium pasteurianum BC1, complete genomeATP-dependent protease La9e-1582.4
NC_012988:1459961:1473500147350014759112412Methylobacterium extorquens DM4, complete genomeDNA-binding ATP-dependent protease La, induced by heat shock and other stresses2e-1481.6
NC_012108:2542328:2558057255805725604652409Desulfobacterium autotrophicum HRM2, complete genomeLon33e-1480.5
NC_014935:416609:4292994292994317162418Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeATP-dependent proteinase4e-1480.5
NC_014960:1697818:1703949170394917054571509Anaerolinea thermophila UNI-1, complete genomeATP-dependent protease La8e-1479.3
NC_010725:3992948:3999499399949940019102412Methylobacterium populi BJ001, complete genomeATP-dependent protease La9e-1479.3
NC_012560:1322000:1352518135251813549202403Azotobacter vinelandii DJ, complete genomeATP-dependent protease La1e-1379
NC_021150:1322000:1352530135253013549322403Azotobacter vinelandii CA6, complete genomeATP-dependent protease La1e-1379
NC_015436:440033:4566864566864593372652Spirochaeta coccoides DSM 17374 chromosome, complete genomeATP dependent PIM1 peptidase1e-1378.6
NC_014541:1996811:1996811199681119992432433Ferrimonas balearica DSM 9799 chromosome, complete genomeATP dependent PIM1 peptidase1e-1378.6
NC_017192:714346:7283987283987308182421Arcobacter sp. L, complete genomeATP-dependent protease4e-1377
NC_017079:1476887:1478429147842914797841356Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeDNA repair protein RadA1e-1172.4
NC_013316:1:4532645326466991374Clostridium difficile R20291, complete genomeDNA repair protein2e-1068.2
NC_013282:646569:6465696465696479511383Cronobacter turicensis, complete genomeDNA repair protein radA3e-1067.4
NC_020260:3277007:3295120329512032965021383Cronobacter sakazakii Sp291, complete genomeDNA repair protein RadA3e-1067.4
NC_014618:4010689:4030542403054240319271386Enterobacter cloacae SCF1 chromosome, complete genomeDNA repair protein RadA3e-1067.4
NC_009778:3287693:3304211330421133054851275Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1067.4
NC_007492:2203220:2217490221749022190911602Pseudomonas fluorescens PfO-1, complete genomeRegulator of RNA terminal phosphate cyclase5e-1066.6
NC_009012:2100000:2106433210643321077971365Clostridium thermocellum ATCC 27405, complete genomeDNA repair protein RadA7e-1066.2
NC_009828:1530732:1553270155327015556482379Thermotoga lettingae TMO, complete genomepeptidase S16 lon domain protein1e-0965.5
NC_019978:1477724:1496084149608414984292346Halobacteroides halobius DSM 5150, complete genomeputative ATP-dependent protease2e-0965.1
NC_011297:1296968:1304122130412213054951374Dictyoglomus thermophilum H-6-12, complete genomeDNA repair protein RadA2e-0964.7
NC_011565:69427:7219472194735611368Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,DNA repair protein RadA5e-0963.5
NC_016051:1385490:1410741141074114126571917Thermococcus sp. AM4 chromosome, complete genomeserine protease5e-0963.5
NC_019977:1189242:119193911919391192874936Methanomethylovorans hollandica DSM 15978, complete genomearchaeal serine protease6e-0963.2
NC_017095:2058921:2067521206752120699022382Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative ATP-dependent protease7e-0962.8
NC_007946:3811082:3811082381108238126801599Escherichia coli UTI89, complete genometranscriptional regulator RtcR9e-0962.4
NC_011751:3984236:3984236398423639858341599Escherichia coli UMN026 chromosome, complete genomesigma 54-dependent transcriptional regulator of rtcBA expression9e-0962.4
NC_010519:416658:4177114177114190871377Haemophilus somnus 2336 chromosome, complete genomeDNA repair protein RadA1e-0862.4
NC_008563:3843859:3843859384385938454181560Escherichia coli APEC O1, complete genometranscriptional regulatory protein RtcR1e-0862
NC_008253:3666387:3664807366480736664051599Escherichia coli 536, complete genometranscriptional regulatory protein RtcR1e-0862
NC_011742:3758618:3758618375861837601771560Escherichia coli S88 chromosome, complete genome1e-0862
NC_004431:3986472:3984892398489239864901599Escherichia coli CFT073, complete genomeTranscriptional Regulatory protein rtcR1e-0862
NC_020418:116500:1535131535131550991587Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulatory protein RtcR2e-0861.6
NC_014207:1366766:1366766136676613689072142Methylotenera sp. 301 chromosome, complete genomepeptidase S16 lon domain protein2e-0861.2
NC_005213:295994:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp2e-0861.2
NC_002937:1548081:1552107155210715545542448Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeATP-dependent protease, putative2e-0861.2
NC_005213:202400:30893830893838041471477Nanoarchaeum equitans Kin4-M, complete genometRNA-Trp2e-0861.2
NC_012881:3004784:3034768303476830372632496Desulfovibrio salexigens DSM 2638, complete genomepeptidase S16 lon domain protein3e-0860.8
NC_009495:2571732:2573017257301725745401524Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMg chelatase-like protein4e-0860.5
NC_009783:2306953:2321090232109023227301641Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein4e-0860.5
NC_014328:1379437:1394769139476913962861518Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ATPase4e-0860.5
NC_016776:701684:7164797164797178461368Bacteroides fragilis 638R, complete genomeputative DNA repair protein5e-0860.1
NC_003228:648669:6608456608456622121368Bacteroides fragilis NCTC 9343, complete genomeputative DNA repair protein5e-0860.1
NC_006347:700838:7130147130147143811368Bacteroides fragilis YCH46, complete genomeputative DNA repair protein5e-0860.1
NC_015573:3167207:3167207316720731685711365Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA repair protein RadA6e-0860.1
NC_019970:336472:3514883514883528341347Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA repair protein RadA6e-0859.7
NC_008577:1885809:1885809188580918875571749Shewanella sp. ANA-3 chromosome 1, complete sequenceconserved hypothetical ATP-dependent protease7e-0859.7
NC_020409:393329:4224594224594249152457Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePeptidase S16 lon domain protein1e-0759.3
NC_015850:736680:7410787410787424841407Acidithiobacillus caldus SM-1 chromosome, complete genomesigma-54 dependent DNA-binding response regulator9e-0859.3
NC_010531:428000:4429744429744442421269Polynucleobacter necessarius STIR1, complete genomeDNA repair protein RadA9e-0859.3
NC_007503:2098980:2102231210223121035651335Carboxydothermus hydrogenoformans Z-2901, complete genomeDNA repair protein RadA8e-0859.3
NC_011740:3453455:3453455345345534550531599Escherichia fergusonii ATCC 35469, complete genomesigma 54-dependent transcriptional regulator of rtcBA expression8e-0859.3
NC_014618:690056:6947676947676963381572Enterobacter cloacae SCF1 chromosome, complete genomesigma 54 interacting domain-containing protein1e-0758.9
NC_016593:2447938:2450106245010624521752070Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeSensory box sigma-54 dependent DNA-binding response regulator1e-0758.9
NC_015519:426948:4300394300394316071569Tepidanaerobacter sp. Re1 chromosome, complete genomeFis family sigma-54 specific transcriptional regulator1e-0758.9
NC_014206:1745203:1770563177056317722631701Geobacillus sp. C56-T3 chromosome, complete genomeFis family PAS modulated sigma-54 specific transcriptional regulator1e-0758.9
NC_015958:57957:5984559845614791635Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeDNA polymerase III subunits gamma and tau2e-0758.5
NC_017192:1137724:1139532113953211408811350Arcobacter sp. L, complete genomeDNA repair protein RadA1e-0758.5
NC_002937:1233000:1247371124737112488101440Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completesigma-54 dependent transcriptional regulator, putative/response regulator1e-0758.5
NC_012108:442493:4628014628014641621362Desulfobacterium autotrophicum HRM2, complete genomeRadA1e-0758.5
NC_021150:3416450:3419316341931634207971482Azotobacter vinelandii CA6, complete genomesigma54-dependent activator protein2e-0758.2
NC_012560:3416451:3419317341931734207981482Azotobacter vinelandii DJ, complete genomesigma54-dependent activator protein2e-0758.2
NC_009092:2282437:2284251228425122866532403Shewanella loihica PV-4, complete genomeputative ATP-dependent protease La-relatedprotein2e-0758.2
NC_020126:6264651:6270878627087862722811404Myxococcus stipitatus DSM 14675, complete genomeDNA-binding response regulator3e-0757.8
NC_014377:1897857:1912112191211219147452634Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system transcriptional activator3e-0757.8
NC_016023:875416:8899488899488922542307Bacillus coagulans 36D1 chromosome, complete genomesigma-54 factor interaction domain-containing protein3e-0757.8
NC_016048:2055199:2070197207019720715911395Oscillibacter valericigenes Sjm18-20, complete genomeDNA repair protein RadA3e-0757.8
NC_010520:2635750:2635750263575026372731524Clostridium botulinum A3 str. Loch Maree, complete genomeMg chelatase homolog3e-0757.8
NC_010995:1459831:1479048147904814804181371Cellvibrio japonicus Ueda107, complete genomeDNA repair protein RadA4e-0757.4
NC_020291:1437431:1452318145231814538381521Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMg chelatase, subunit ChlI3e-0757.4
NC_016148:1105669:1133795113379511363082514Thermovirga lienii DSM 17291 chromosome, complete genomepeptidase S16 lon domain-containing protein4e-0757
NC_013592:1730505:1756590175659017583201731Dickeya dadantii Ech586, complete genomehypothetical protein4e-0757
NC_008609:2446246:2459983245998324620222040Pelobacter propionicus DSM 2379, complete genomeATP-dependent Lon-type protease4e-0757
NC_012968:1108687:1108687110868711107952109Methylotenera mobilis JLW8, complete genomeATP-dependent protease-like protein6e-0756.6
NC_012793:2337776:2357742235774223598082067Geobacillus sp. WCH70, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family6e-0756.6
NC_012673:1600242:1602157160215716035331377Exiguobacterium sp. AT1b, complete genomeDNA repair protein RadA6e-0756.6
NC_014926:1381152:1403967140396714052681302Thermovibrio ammonificans HB-1 chromosome, complete genomeDNA repair protein RadA6e-0756.6
NC_016633:2239413:2256469225646922585022034Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative ATP-dependent protease5e-0756.6
NC_015519:2526047:2546896254689625492812386Tepidanaerobacter sp. Re1 chromosome, complete genome8e-0756.2
NC_012912:1788308:1818988181898818207181731Dickeya zeae Ech1591, complete genomehypothetical protein7e-0756.2
NC_009674:2923707:2934249293424929363212073Bacillus cytotoxicus NVH 391-98 chromosome, complete genomesigma-54 dependent trancsriptional regulator7e-0756.2
NC_012751:1190206:1211828121182812132101383Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA repair/recombination protein6e-0756.2
NC_011026:2450325:2469834246983424709131080Chloroherpeton thalassium ATCC 35110, complete genomemagnesium chelatase ATPase subunit I1e-0655.8
NC_013421:1744928:1752564175256417541621599Pectobacterium wasabiae WPP163, complete genomeSigma 54 interacting domain protein1e-0655.8
NC_013892:753307:7897557897557914851731Xenorhabdus bovienii SS-2004 chromosome, complete genomeATP-dependent protease1e-0655.5
NC_011831:2795819:2810088281008828116051518Chloroflexus aggregans DSM 9485, complete genomeMg chelatase, subunit ChlI1e-0655.5
NC_013421:3117639:3121227312122731229961770Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-0655.5
NC_012108:2305327:2340588234058823428162229Desulfobacterium autotrophicum HRM2, complete genomesigma-54 dependent two component DNA-binding response regulator (Fis family protein)1e-0655.5
NC_005213:202400:347905347905348897993Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein2e-0655.1
NC_005213:295994:347905347905348897993Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein2e-0655.1
NC_014844:1270618:1294372129437212957691398Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesigma-54 factor interaction domain-containing protein2e-0655.1
NC_008593:1797000:1803340180334018049021563Clostridium novyi NT, complete genometranscriptional regulator2e-0655.1
NC_020911:2921925:2956332295633229573871056Octadecabacter antarcticus 307, complete genometranscriptional regulatory protein2e-0655.1
NC_016602:1994110:2007239200723920086571419Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceATP-dependent protease LA-related protein2e-0655.1
NC_019907:318077:3371413371413385021362Liberibacter crescens BT-1 chromosome, complete genometwo component response regulator nitrogen assimilation regulatory protein1e-0655.1
NC_007517:1561466:1565515156551515668911377Geobacter metallireducens GS-15, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family2e-0654.7
NC_009483:2086021:2087611208761120889901380Geobacter uraniireducens Rf4 chromosome, complete genometwo component sigma-54 specific Fis family transcriptional regulator2e-0654.7
NC_011296:1086223:1086223108622310875631341Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacetoacetate metabolism regulatory protein AtoC2e-0654.7
NC_015425:405058:4050584050584065571500Clostridium botulinum BKT015925 chromosome, complete genomesigma-54 dependent regulatory protein2e-0654.7
NC_015681:1859674:1877599187759918789931395Thermodesulfatator indicus DSM 15286 chromosome, complete genomeFis family two component sigma-54 specific transcriptional regulator3e-0654.3
NC_009802:1077926:1094607109460710959471341Campylobacter concisus 13826, complete genomeDNA repair protein RadA3e-0654.3
NC_015565:1511426:1518452151845215198131362Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completePAS modulated sigma54 specific Fis family transcriptional regulator3e-0654.3
NC_011186:515214:5152145152145175442331Vibrio fischeri MJ11 chromosome II, complete sequenceATP-dependent protease La3e-0654.3
NC_014972:2371647:2373659237365923750561398Desulfobulbus propionicus DSM 2032 chromosome, complete genomeFis family two component sigma54 specific transcriptional regulator4e-0653.9
NC_014378:131810:1489241489241503121389Acetohalobium arabaticum DSM 5501 chromosome, complete genomeDNA repair protein RadA4e-0653.9
NC_010999:2450974:2467458246745824688221365Lactobacillus casei, complete genomeDNA repair protein RadA4e-0653.9
NC_011725:334000:3470963470963484631368Bacillus cereus B4264 chromosome, complete genomesensory box sigma-54 dependent DNA-binding response regulator4e-0653.9
NC_017208:64500:1011481011481025241377Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA repair protein RadA4e-0653.9
NC_017506:2089769:2111972211197221131501179Marinobacter adhaerens HP15 chromosome, complete genometwo component Fis family sigma54-specific transcriptional regulator3e-0653.9
NC_011567:75306:9353593535949291395Anoxybacillus flavithermus WK1, complete genomeATP-dependent serine protease, RadA3e-0653.9
NC_010943:1379707:1400584140058414019601377Stenotrophomonas maltophilia K279a, complete genomeputative DNA repair protein RadA (DNA repair protein SMS)3e-0653.9
NC_021184:657093:6619976619976639641968Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains5e-0653.5
NC_014972:2503107:2515974251597425183792406Desulfobulbus propionicus DSM 2032 chromosome, complete genomePAS modulated Fis family sigma-54 specific transcriptional regulator5e-0653.5
NC_012032:1878854:1884796188479618863131518Chloroflexus sp. Y-400-fl, complete genomeMg chelatase, subunit ChlI5e-0653.5
NC_011661:1542335:1542335154233515438551521Dictyoglomus turgidum DSM 6724, complete genomeMg chelatase, subunit ChlI4e-0653.5
NC_008710:79100:8096680966824951530Borrelia turicatae 91E135, complete genomemagnesium chelatase subunit ChlI-related ATPase7e-0653.1
NC_004722:4117459:4128000412800041300722073Bacillus cereus ATCC 14579, complete genomeSigma-54-dependent transcriptional activator7e-0653.1
NC_014335:3902155:3913065391306539151372073Bacillus cereus biovar anthracis str. CI chromosome, completesensory box sigma-54 dependent DNA-binding response regulator7e-0653.1
NC_014916:22644:3756237562394811920Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceproprionate catabolism activator, Fis family7e-0653.1
NC_013412:33834:3725137251391701920Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequenceproprionate catabolism activator, Fis family7e-0653.1
NC_014318:1320170:1321645132164513227511107Amycolatopsis mediterranei U32 chromosome, complete genomePDZ domain-containing protein7e-0653.1
NC_017186:1320186:1321661132166113227671107Amycolatopsis mediterranei S699 chromosome, complete genomePDZ domain-containing protein7e-0653.1
NC_015311:510661:5106615106615122021542Prevotella denticola F0289 chromosome, complete genomeMg chelatase-like protein6e-0653.1
NC_011094:3853036:3853036385303638558342799Salmonella enterica subsp. enterica serovar Schwarzengrund strsigma-54 dependent transcription regulator6e-0653.1
NC_014541:2122788:2126548212654821282961749Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent protease6e-0653.1
NC_016810:3993863:3993863399386339966612799Salmonella enterica subsp. enterica serovar Typhimurium strputative NtrC family transcriptional regulator8e-0652.8
NC_016856:3985597:3986241398624139890392799Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator8e-0652.8
NC_016857:3993864:3993864399386439966622799Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74sigma-54 dependent transcription regulator8e-0652.8
NC_016863:3933848:3933848393384839366462799Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator8e-0652.8
NC_017046:3991551:3992691399269139954892799Salmonella enterica subsp. enterica serovar Typhimurium str. 798NtrC-family transcriptional regulator8e-0652.8
NC_011899:86800:1067311067311080861356Halothermothrix orenii H 168, complete genomeDNA repair protein RadA8e-0652.8
NC_011080:3941909:3941909394190939447072799Salmonella enterica subsp. enterica serovar Newport str. SL254,sigma-54 dependent transcription regulator8e-0652.8
NC_016860:3995445:3995445399544539982432799Salmonella enterica subsp. enterica serovar Typhimurium strsigma-54 dependent transcriptional regulator9e-0652.8
NC_003197:3971905:3972549397254939753472799Salmonella typhimurium LT2, complete genomeputative transcriptional regulator9e-0652.8
NC_011979:3712845:3723132372313237245051374Geobacter sp. FRC-32, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family9e-0652.8
NC_011083:3985618:3986758398675839895562799Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sigma-54 dependent transcription regulator9e-0652.8
NC_011147:3755725:3756369375636937591672799Salmonella enterica subsp. enterica serovar Paratyphi A strNtrC family transcriptional regulator9e-0652.8
NC_006511:3759550:3760690376069037634882799Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative NtrC family transcriptional regulators, ATPase domain9e-0652.8
NC_011149:3895921:3897061389706138998592799Salmonella enterica subsp. enterica serovar Agona str. SL483,sigma-54 dependent transcription regulator9e-0652.8
NC_014171:4039120:4050725405072540527972073Bacillus thuringiensis BMB171 chromosome, complete genomesigma-54-dependent transcriptional activator9e-0652.8
NC_006274:4031246:4041786404178640438582073Bacillus cereus E33L, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_008600:3976045:3989942398994239920142073Bacillus thuringiensis str. Al Hakam, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_014328:4387303:4391932439193243937461815Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator7e-0652.8
NC_007512:1539095:1540713154071315420021290Pelodictyon luteolum DSM 273, complete genomeputative transcriptional regulator, Fis family7e-0652.8
NC_003909:3941282:3952356395235639544282073Bacillus cereus ATCC 10987, complete genomesensory box sigma-54 dependent DNA-binding response regulator7e-0652.8
NC_007508:1446526:1470595147059514719861392Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeDNA repair protein7e-0652.8
NC_005957:3975192:3990147399014739922192073Bacillus thuringiensis serovar konkukian str. 97-27, completesensory box sigma-54 dependent DNA-binding response regulator7e-0652.8
NC_012659:3992684:4003570400357040056422073Bacillus anthracis str. A0248, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_011297:1357947:1357947135794713594671521Dictyoglomus thermophilum H-6-12, complete genomeMg chelatase8e-0652.8
NC_007530:3992228:4003670400367040057422073Bacillus anthracis str. 'Ames Ancestor', complete genomesensory box sigma-54 dependent dna-binding response regulator8e-0652.8
NC_003997:3993223:4003543400354340056152073Bacillus anthracis str. Ames, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_011773:3982008:3995893399589339979652073Bacillus cereus AH820 chromosome, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_016779:3913627:3925073392507339271452073Bacillus cereus F837/76 chromosome, complete genomeTranscriptional regulator BkdR8e-0652.8
NC_002939:1634843:1640718164071816420941377Geobacter sulfurreducens PCA, complete genomesigma-54 dependent DNA-binding response regulator8e-0652.8
NC_010184:4021688:4035572403557240376442073Bacillus weihenstephanensis KBAB4, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family8e-0652.8
NC_011969:3879412:3893517389351738955892073Bacillus cereus Q1 chromosome, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_005945:3992600:4004042400404240061142073Bacillus anthracis str. Sterne, complete genomesensory box sigma-54 dependent DNA-binding response regulator8e-0652.8
NC_011725:4159000:4170157417015741722712115Bacillus cereus B4264 chromosome, complete genomesensory box sigma-54 dependent DNA-binding response regulator9e-0652.4
NC_009922:2590317:2590317259031725920591743Alkaliphilus oremlandii OhILAs, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family9e-0652.4
NC_014532:349384:3503073503073519111605Halomonas elongata DSM 2581, complete genomeputative PAS/PAC sensor protein9e-0652.4
NC_015711:570910:5774205774205787871368Myxococcus fulvus HW-1 chromosome, complete genomeDNA repair protein RadA9e-0652.4
NC_010102:3919999:3920643392064339234412799Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0552.4