Pre_GI Gene

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Host: NC_002937 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002937:1395977 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13959771396258282ribosomal protein S19QuickGO ontologyBLASTP
13962711396609339ribosomal protein L22QuickGO ontologyBLASTP
13966141397252639ribosomal protein S3QuickGO ontologyBLASTP
1397255139766841450S ribosomal protein L16QuickGO ontologyBLASTP
13976701397855186ribosomal protein L29QuickGO ontologyBLASTP
13978661398132267ribosomal protein S17QuickGO ontologyBLASTP
13981431398511369ribosomal protein L14QuickGO ontologyBLASTP
13985211398844324ribosomal protein L24QuickGO ontologyBLASTP
13988561399395540ribosomal protein L5QuickGO ontologyBLASTP
13994081399593186ribosomal protein S14QuickGO ontologyBLASTP
13996121399992381ribosomal protein S8QuickGO ontologyBLASTP
1400005140054454050S ribosomal protein L6QuickGO ontologyBLASTP
14005581400917360ribosomal protein L18QuickGO ontologyBLASTP
14009371401428492ribosomal protein S5QuickGO ontologyBLASTP
14014381401608171ribosomal protein L30QuickGO ontologyBLASTP
14016081402054447ribosomal protein L15QuickGO ontologyBLASTP
140205814033711314preprotein translocase SecYQuickGO ontologyBLASTP
14033731404152780methionine aminopeptidase type IQuickGO ontologyBLASTP
14042461404359114ribosomal protein L36QuickGO ontologyBLASTP
1404378140474636930S ribosomal protein S13QuickGO ontologyBLASTP
1404895140528439030S ribosomal protein S11QuickGO ontologyBLASTP
1405300140592662730S ribosomal protein S4QuickGO ontologyBLASTP
140593914069821044DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
14069721407373402ribosomal protein L17QuickGO ontologyBLASTP
14075151408441927transcriptional regulator LysR familyQuickGO ontologyBLASTP
14095141409639126hypothetical protein
140978514110861302trigger factorQuickGO ontologyBLASTP
14112731411878606ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
141188914131421254ATP-dependent protease ATP-binding subunitQuickGO ontologyBLASTP
141326114157262466ATP-dependent protease LaQuickGO ontologyBLASTP
14158891416473585hypothetical proteinBLASTP
14167741417604831lipoprotein putativeQuickGO ontologyBLASTP
14177661418260495transcriptional regulator Fur familyQuickGO ontologyBLASTP
14182571419081825cation ABC transporter permease proteinQuickGO ontologyBLASTP