Pre_GI Gene

Some Help

Host: NC_011186 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011186:515214 Vibrio fischeri MJ11 chromosome II, complete sequence

Host Lineage: Aliivibrio fischeri; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from a pinecone fish, Monocentris japonica, light-emitting organs in Japan. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This organism is found in marine environments and was originally named by Bernard Fischer during a sea voyage in the 1800s. It is a symbiont in fish and squids and is responsible for light generation in those organisms, which use it as a defense mechanism to avoid predators.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5152145175442331ATP-dependent protease LaQuickGO ontologyBLASTP
5177405189691230hypothetical protein
519041519382342dopa 45-dioxygenaseQuickGO ontologyBLASTP
5194645204951032L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
52049552169111972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
521813522745933transcriptional regulator LysR familyQuickGO ontologyBLASTP
522742523119378hypothetical protein
523565525116155216S ribosomal RNAQuickGO ontologyBLASTP
52520452527976tRNA-GluQuickGO ontology
52528252535776tRNA-LysQuickGO ontologyBLASTP
52541952549476tRNA-ValQuickGO ontologyBLASTP
526030528922289323S ribosomal RNAQuickGO ontologyBLASTP
5290525291721215S ribosomal RNAQuickGO ontologyBLASTP
52923452931077tRNA-TrpQuickGO ontologyBLASTP
530242531162921manganese-dependent inorganic pyrophosphataseQuickGO ontologyBLASTP
531225531377153putative nonsense-mediated mRNA decay protein NMD3 family proteinQuickGO ontology
531630532154525flagellar biosynthesis protein FlhFQuickGO ontologyBLASTP
5323295344642136DNA internalization-related competence protein ComECRec2QuickGO ontologyBLASTP
5344995362471749lipid A export permeaseATP-binding protein MsbAQuickGO ontologyBLASTP
536247537233987tetraacyldisaccharide 4-kinaseQuickGO ontologyBLASTP
537235537432198tetraacyldisaccharide 4-kinase Lipid A 4-kinaseQuickGO ontologyBLASTP
5374145381637503-deoxy-D-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
538232539095864integral membrane proteinQuickGO ontologyBLASTP
539333540010678protein SmtAQuickGO ontologyBLASTP
5400365413731338chromosome partition protein MukF Protein kicBQuickGO ontologyBLASTP
541354542091738chromosome partition protein MukE Protein kicAQuickGO ontologyBLASTP
5420885465604473chromosome partition protein MukBQuickGO ontologyBLASTP