Pre_GI Gene

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Host: NC_008782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008782:1277117 Acidovorax sp. JS42, complete genome

Host Lineage: Acidovorax; Acidovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Acidovorax sp. JS42, formerly Pseudomonas sp. JS42, was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
127711712782741158efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
127838112815303150acriflavin resistance proteinQuickGO ontologyBLASTP
1281620128170687tRNA-LeuQuickGO ontologyBLASTP
128178512830951311trigger factorQuickGO ontologyBLASTP
12832191283827609ATP-dependent Clp protease proteolytic subunit ClpPQuickGO ontologyBLASTP
128392512851901266ATP-dependent Clp protease ATP-binding subunit ClpXQuickGO ontologyBLASTP
128533012877502421ATP-dependent protease LaQuickGO ontologyBLASTP
1287848128792376tRNA-GlyQuickGO ontologyBLASTP
128814812893831236phage integrase family proteinQuickGO ontologyBLASTP
128944412909761533Integrase catalytic regionQuickGO ontologyBLASTP
12909661291787822IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
12918351292470636IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
12942311295220990transcriptional regulator AraC familyQuickGO ontologyBLASTP
12952451295880636transcriptional regulator LysR familyQuickGO ontologyBLASTP
12960541296671618hypothetical proteinBLASTP
129666812983381671Integrase catalytic regionQuickGO ontologyBLASTP
12983351299231897TniB family proteinQuickGO ontologyBLASTP