Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:473354 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4733544747361383hypothetical protein
4747394761211383amino acid carrier proteinQuickGO ontologyBLASTP
476696476917222small acid-soluble spore protein alphabeta typeQuickGO ontologyBLASTP
4771024784481347phosphoglucosamine mutaseQuickGO ontologyBLASTP
4788754801611287trigger factorQuickGO ontologyBLASTP
480272480853582ATP-dependent Clp protease proteolytic subunit ClpPQuickGO ontologyBLASTP
4809184822191302ATP-dependent Clp protease ATP-binding subunit ClpXQuickGO ontologyBLASTP
4823734848022430ATP-dependent protease LaQuickGO ontologyBLASTP
485065485670606GTP-binding protein HSR1-relatedQuickGO ontologyBLASTP
4861044874591356MATE efflux family proteinQuickGO ontologyBLASTP
4882374897331497methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
489955490506552hypothetical protein
490581491561981protein of unknown function DUF939QuickGO ontologyBLASTP