Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:1876435 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18764351877241807conserved hypothetical protein putative Isocitrate lyase and phosphorylmutase domainsQuickGO ontologyBLASTP
187756918792001632putative aldehyde dehydrogenaseQuickGO ontologyBLASTP
18792531879483231hypothetical protein
18796811880322642Putative two-component system response regulatorQuickGO ontologyBLASTP
18804261880572147Putative acetyltransferase partialQuickGO ontology
188079018822741485Putative WD-40 repeat proteinQuickGO ontologyBLASTP
188366818852301563hypothetical proteinBLASTP
188554118869981458Putative transcriptional regulatorQuickGO ontologyBLASTP
18873731887561189hypothetical proteinBLASTP
18875581888061504hypothetical proteinBLASTP
18880581888417360hypothetical proteinBLASTP
18892091889526318hypothetical protein
188951518907321218IntegraseQuickGO ontologyBLASTP
1890856189093176tRNA-HisQuickGO ontology
18910901891860771OligoribonucleaseQuickGO ontologyBLASTP
18919041892380477hypothetical protein putative signal peptideQuickGO ontology
18925291892762234hypothetical protein
189292318955472625DNA-binding ATP-dependent protease La heat shock K-proteinQuickGO ontologyBLASTP
18955751895826252hypothetical protein
18958921896860969Putative pirin-like proteinQuickGO ontologyBLASTP
18968411897080240hypothetical protein
18972441897918675putative transcriptional regulator with cyclic nucleotide-binding domain CrPFnr-familyQuickGO ontologyBLASTP
18979901898754765hypothetical proteinBLASTP