Pre_GI: BLASTP Hits

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Query: NC_005362:52848:68742 Lactobacillus johnsonii NCC 533, complete genome

Start: 68742, End: 70337, Length: 1596

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014106:54587:5458754587560291443Lactobacillus crispatus ST1, complete genomeGlutamate/gamma-aminobutyrate antiporter0698
NC_006814:51500:5256852568540251458Lactobacillus acidophilus NCFM, complete genomeglutamategamma-aminobutyrate antiporter0684
NC_008497:79144:7992879928814331506Lactobacillus brevis ATCC 367, complete genomeGlutamate gamma-aminobutyrate antiporter2e-116419
NC_010080:69000:703367033671160825Lactobacillus helveticus DPC 4571, complete genome2e-101369
NC_011353:2004800:2004800200480020063351536Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeglutamate:gamma aminobutyrate antiporter2e-74280
NC_004741:1792442:1809541180954118110761536Shigella flexneri 2a str. 2457T, complete genomeacid sensitivity protein, putative transporter4e-74279
NC_009801:1678790:1678790167879016803251536Escherichia coli E24377A, complete genomeglutamate:gamma aminobutyrate antiporter4e-74279
NC_010658:1593137:1593137159313715946721536Shigella boydii CDC 3083-94, complete genomeglutamate:gamma aminobutyrate antiporter4e-74279
NC_008258:1750964:1771126177112617726611536Shigella flexneri 5 str. 8401, complete genomeacid sensitivity protein, putative transporter4e-74279
AP010958:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted glutamate:gamma-aminobutyric acid antiporter GadC4e-74279
NC_007613:1533024:1556412155641215579471536Shigella boydii Sb227, complete genomeacid sensitivity protein, putative transporter4e-74279
NC_013353:1711656:1711656171165617131911536Escherichia coli O103:H2 str. 12009, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-74279
NC_013361:2047170:2047170204717020487051536Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglutamate:gamma-aminobutyric acid antiporter GadC4e-74279
NC_013364:1902761:1902761190276119042961536Escherichia coli O111:H- str. 11128, complete genomeputative glutamate:gamma-aminobutyric acid antiporter GadC4e-74279
NC_013941:1894496:1894496189449618960311536Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeglutamate/gamma-aminobutyrate antiporter4e-74279
NC_016822:1781644:1801998180199818035331536Shigella sonnei 53G, complete genomeglutamate/g-aminobutyrate antiporter4e-74279
NC_004431:1754627:1754627175462717561621536Escherichia coli CFT073, complete genomeAmino acid antiporter4e-74279
NC_011740:1595381:1615255161525516167901536Escherichia fergusonii ATCC 35469, complete genomeglutamate:gamma-aminobutyric acid antiporter4e-73276
NC_015214:48999:500375003750462426Lactobacillus acidophilus 30SC chromosome, complete genomeglutamate/gamma-aminobutyrate antiporter1e-44181
NC_014618:2423661:2444986244498624464371452Enterobacter cloacae SCF1 chromosome, complete genomeamino acid permease5e-44179
NC_015224:3892972:3907937390793739094931557Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative amino acid permease6e-39162
NC_004741:2526421:2536123253612325375831461Shigella flexneri 2a str. 2457T, complete genomeputative amino acid antiporter3e-38160
NC_008258:2542863:2552467255246725539271461Shigella flexneri 5 str. 8401, complete genomeputative amino acid antiporter3e-38160
NC_004337:2548288:2557990255799025594501461Shigella flexneri 2a str. 301, complete genomeputative amino acid antiporter3e-38160
NC_017328:2586171:2595628259562825970881461Shigella flexneri 2002017 chromosome, complete genomeputative amino acid antiporter3e-38160
NC_008800:4013298:4030666403066640322221557Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative amino acid permease2e-38160
NC_009614:4802000:4809599480959948111761578Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglutamate/gamma-aminobutyrate anti-porter6e-31135
NC_014507:2319842:2333086233308623345161431Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein9e-30132
NC_014507:2568933:2568933256893325703721440Methanoplanus petrolearius DSM 11571 chromosome, complete genomeamino acid permease-associated protein8e-28125
NC_009380:4944183:4952656495265649541431488Salinispora tropica CNB-440 chromosome, complete genomeamino acid permease-associated protein1e-25118
NC_012658:2641446:2663215266321526646601446Clostridium botulinum Ba4 str. 657 chromosome, complete genomeamino acid permease family protein6e-1789.4
NC_009495:2606238:2607869260786926093141446Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeamino acid permease6e-1789.4
NC_009697:2478261:2479892247989224813371446Clostridium botulinum A str. ATCC 19397 chromosome, completeamino acid permease6e-1789.4
NC_009698:2450606:2452237245223724536821446Clostridium botulinum A str. Hall chromosome, complete genomeamino acid permease6e-1789.4
NC_012563:2761570:2782140278214027835851446Clostridium botulinum A2 str. Kyoto, complete genomeamino acid permease family protein8e-1789
NC_010520:2668702:2670322267032226717671446Clostridium botulinum A3 str. Loch Maree, complete genomeamino acid permease family protein1e-1688.6
NC_017297:2635892:2656451265645126578961446Clostridium botulinum F str. 230613 chromosome, complete genomeamino acid permease family protein1e-1688.2
NC_009699:2654672:2656302265630226577471446Clostridium botulinum F str. Langeland chromosome, complete genomeamino acid permease1e-1688.2
NC_010516:2594159:2595779259577925972241446Clostridium botulinum B1 str. Okra, complete genomeamino acid permease family protein1e-1688.2
NC_008262:1139500:1153130115313011545991470Clostridium perfringens SM101, complete genomeamino acid permease family protein8e-1479
NC_008261:1332864:1346362134636213478311470Clostridium perfringens ATCC 13124, complete genomeamino acid permease family protein1e-1378.2
NC_003366:1122654:1135498113549811369671470Clostridium perfringens str. 13, complete genomehypothetical protein2e-1377.8
NC_002162:268049:2680492680492703282280Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomeamino acid antiporter4e-1376.6
NC_007164:2261644:2266667226666722681301464Corynebacterium jeikeium K411, complete genomegamma-aminobutyrate permease3e-0860.5
NC_013508:275081:2913392913392926341296Edwardsiella tarda EIB202, complete genomeputrescine transport protein3e-0860.5
NC_010067:3247169:3268853326885332701901338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0859.7
NC_020063:2785652:2795382279538227967071326Enterobacteriaceae bacterium strain FGI 57, complete genomeputrescine:ornithine antiporter, APA family9e-0858.9
NC_015873:1557999:1571297157129715726671371Megasphaera elsdenii DSM 20460, complete genomearomatic amino acid transporter1e-0758.5
NC_009801:995396:9965629965629981841623Escherichia coli E24377A, complete genomeamino acid permease family protein2e-0758.2
NC_005362:1954443:1970494197049419719751482Lactobacillus johnsonii NCC 533, complete genomeamino acid transporter3e-0757.4
NC_002947:4994335:4999146499914650005281383Pseudomonas putida KT2440, complete genomegamma-aminobutyrate transporter, putative3e-0757.4
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein3e-0757
NC_011094:1050700:1059485105948510609061422Salmonella enterica subsp. enterica serovar Schwarzengrund strinner membrane transporter YcaM4e-0756.6
NC_021066:4177217:4184900418490041862521353Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease5e-0756.6
NC_008262:2242432:2264082226408222655721491Clostridium perfringens SM101, complete genomeamino acid permease family protein5e-0756.2
NC_003366:2356148:2377731237773123792091479Clostridium perfringens str. 13, complete genomehypothetical protein7e-0756.2
NC_005362:1651767:1658228165822816596011374Lactobacillus johnsonii NCC 533, complete genomehypothetical protein8e-0755.8
NC_016614:1543333:1562996156299615643391344Vibrio sp. EJY3 chromosome 2, complete sequenceputrescine transporter8e-0755.8
NC_012779:305969:312154312154313143990Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0654.7
NC_013504:1468227:1474732147473214761051374Lactobacillus johnsonii FI9785 chromosome, complete genomeAromatic amino acid transport protein aroP2e-0654.7
NC_008054:1502210:1510839151083915120831245Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-0654.7
NC_008529:1514000:1521980152198015234311452Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeAmino acid transporter3e-0653.9
NC_015136:912276:9310529310529324311380Burkholderia sp. CCGE1001 chromosome 1, complete sequenceamino acid permease-associated protein3e-0653.9
NC_015424:4251369:4259132425913242604661335Aeromonas veronii B565 chromosome, complete genomeamino acid permease superfamily4e-0653.5
NC_008268:3162824:3184889318488931867121824Rhodococcus sp. RHA1, complete genomegamma-aminobutyrate transporter, APC family6e-0652.8