Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2004800 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
200480020063351536glutamategamma aminobutyrate antiporterQuickGO ontologyBLASTP
200649120078911401glutamate decarboxylaseQuickGO ontologyBLASTP
200825220110352784peptidase M16B familyQuickGO ontologyBLASTP
201109220134642373TonB-dependent receptorQuickGO ontologyBLASTP
201350220151871686inner membrane ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
201547820166351158radical SAM domain-containing proteinQuickGO ontologyBLASTP
20187732019534762transcriptional regulator YdeOQuickGO ontologyBLASTP
20196082019790183hypothetical proteinBLASTP
202005320223322280oxidoreductaseQuickGO ontologyBLASTP
20226662023580915FimH-like proteinQuickGO ontologyBLASTP
20236402023930291FimG-like proteinQuickGO ontologyBLASTP
20241562024686531FimF-like proteinQuickGO ontologyBLASTP
202470020269222223fimbrial usher family proteinQuickGO ontologyBLASTP