Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1894496 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
189449618960311536glutamategamma-aminobutyrate antiporterQuickGO ontologyBLASTP
189618718975871401glutamate decarboxylase betaQuickGO ontologyBLASTP
189794919007442796peptidaseQuickGO ontologyBLASTP
190078919031612373TonB-dependent receptorQuickGO ontologyBLASTP
190319919048841686inner membrane ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
190517519063471173hypothetical proteinBLASTP
190638419080991716sulfataseQuickGO ontologyBLASTP
19084701909231762transcriptional regulator YdeOQuickGO ontologyBLASTP
19093051909502198Two-component-system connector protein yneNQuickGO ontologyBLASTP
190975019120292280oxidoreductase major subunitQuickGO ontologyBLASTP
19123631913277915transcriptional regulator BolAQuickGO ontologyBLASTP
19133371913840504hypothetical proteinBLASTP
19138531914383531biofilm-dependent modulation proteinQuickGO ontologyBLASTP
191439719170482652Fimbrial usher family proteinQuickGO ontologyBLASTP
19170901917809720P pilus assembly protein chaperone PapDQuickGO ontologyBLASTP