Pre_GI Gene

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Host: NC_014106 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014106:54587 Lactobacillus crispatus ST1, complete genome

Host Lineage: Lactobacillus crispatus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. Lactobacilli are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus crispatus is a member of the normal human oral, gastrointestinal, and genital tract microflora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
54587560291443Glutamategamma-aminobutyrate antiporterQuickGO ontologyBLASTP
56095589232829DNARNA helicase DEADDEAH box familyQuickGO ontologyBLASTP
58958600101053Penicillin-binding proteinQuickGO ontologyBLASTP
60241614311191hypothetical proteinBLASTP
6149361906414Peptide deformylaseQuickGO ontologyBLASTP
624846257693putative protein without homologyQuickGO ontology
6252464075155216S ribosomal RNAQuickGO ontologyBLASTP
6278663220435PG1 protein homology to Homo sapiensQuickGO ontologyBLASTP
6365464007354hypothetical proteinBLASTP
642126428675tRNA-IleQuickGO ontology
643436441573tRNA-AlaQuickGO ontologyBLASTP
6453867443290623S ribosomal RNAQuickGO ontologyBLASTP
6509265562471hypothetical proteinBLASTP
6698367300318Cell wall-associated hydrolaseQuickGO ontologyBLASTP
67516676311165S ribosomal RNAQuickGO ontologyBLASTP
676446771976tRNA-AsnQuickGO ontology
6823868672435AcetyltransferaseQuickGO ontology
6889169112222Steroid binding proteinQuickGO ontologyBLASTP
6920570074870Phospho-beta-glycosidaseQuickGO ontologyBLASTP
7007171018948Lipopolysaccharide biosynthesis glycosyltransferaseQuickGO ontologyBLASTP
7103271985954Lipopolysaccharide biosynthesis glycosyltransferaseQuickGO ontologyBLASTP
7200372839837Lipopolysaccharide biosynthesis glycosyltransferaseQuickGO ontologyBLASTP
72856736177621-acyl-sn-glycerol-3-phosphate acyltransferaseQuickGO ontologyBLASTP
737977386973tRNA-LysQuickGO ontologyBLASTP
7400274223222hypothetical proteinBLASTP
743427441473tRNA-LysQuickGO ontologyBLASTP
7455175267717Response regulatorQuickGO ontologyBLASTP
75338771911854Sensor proteinQuickGO ontologyBLASTP
77172785331362hypothetical proteinBLASTP