Pre_GI Gene

Some Help

Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:1754627 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
175462717561621536Amino acid antiporterQuickGO ontologyBLASTP
175631817577871470Glutamate decarboxylase betaQuickGO ontologyBLASTP
175807917608742796Probable zinc protease pqqLQuickGO ontologyBLASTP
176091917632912373Hypothetical protein yddBQuickGO ontologyBLASTP
176332917650141686Hypothetical ABC transporter ATP-binding protein yddAQuickGO ontologyBLASTP
176530517664771173Hypothetical protein ydeMQuickGO ontologyBLASTP
176651417682291716Putative sulfatase ydeN precursorQuickGO ontologyBLASTP
17685981769359762Hypothetical transcriptional regulator ydeOQuickGO ontologyBLASTP
17694351769632198hypothetical proteinBLASTP
176988017721592280Hypothetical protein ydePQuickGO ontologyBLASTP
17724981773412915Hypothetical fimbrial-like protein ydeQ precursorQuickGO ontologyBLASTP
17734721773975504Hypothetical fimbrial-like protein ydeR precursorQuickGO ontologyBLASTP
17739881774518531Hypothetical fimbrial-like protein ydeS precursorQuickGO ontologyBLASTP
177453217771832652Outer membrane usher protein fimD precursorQuickGO ontologyBLASTP
17772251777935711Chaperone protein fimC precursorQuickGO ontologyBLASTP