Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:1050700 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
105070010520431344recombination factor protein RarAQuickGO ontologyBLASTP
105230210535941293seryl-tRNA synthetaseQuickGO ontologyBLASTP
105383210562762445anaerobic dimethyl sulfoxide reductase subunit AQuickGO ontologyBLASTP
10562871056904618dimethylsulfoxide reductase B subunitQuickGO ontologyBLASTP
10569061057769864anaerobic dimethyl sulfoxide reductase C subunitQuickGO ontologyBLASTP
105811910592671149MFS family transporter proteinQuickGO ontologyBLASTP
105948510609061422inner membrane transporter YcaMQuickGO ontologyBLASTP
10611981061995798pyruvate formate lyase-activating enzyme 1QuickGO ontologyBLASTP
10621231062287165hypothetical protein
10625711063530960hypothetical proteinBLASTP
106360210658842283formate acetyltransferaseQuickGO ontologyBLASTP
10659441066759816formate transporter FocAQuickGO ontologyBLASTP
106720610690411836hypothetical proteinBLASTP
10691031069795693hypothetical proteinBLASTP
106998110710691089phosphoserine aminotransferaseQuickGO ontologyBLASTP
1071140107242312843-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
10725671073328762peptidase M48 Ste24pQuickGO ontologyBLASTP
10735011074184684cytidylate kinaseQuickGO ontologyBLASTP