Pre_GI: BLASTP Hits

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Query: NC_010322:5349000:5399377 Pseudomonas putida GB-1 chromosome, complete genome

Start: 5399377, End: 5401029, Length: 1653

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008228:4696338:4717545471754547191911647Pseudoalteromonas atlantica T6c, complete genomeacyl-CoA dehydrogenase-like8e-148524
NC_017186:5184000:5186416518641651880561641Amycolatopsis mediterranei S699 chromosome, complete genomeacyl-CoA dehydrogenase6e-139494
NC_014318:5183975:5186382518638251880221641Amycolatopsis mediterranei U32 chromosome, complete genomeputative acyl-CoA dehydrogenase6e-139494
NC_013729:3573000:3573104357310435747861683Kribbella flavida DSM 17836, complete genomeacyl-CoA dehydrogenase domain protein2e-124446
NC_015859:3346473:3369325336932533709711647Corynebacterium variabile DSM 44702 chromosome, complete genomeacyl-CoA dehydrogenase3e-116419
NC_003143:398748:3987483987484003911644Yersinia pestis CO92, complete genomeputative acyl-CoA dehydrogenase1e-113410
NC_008150:4373722:4391674439167443933171644Yersinia pestis Antiqua, complete genomeputative acyl-CoA dehydrogenase1e-113410
NC_014029:452248:4522484522484538911644Yersinia pestis Z176003 chromosome, complete genomeputative acyl-CoA dehydrogenase1e-113410
NC_017154:394401:3944013944013960441644Yersinia pestis D106004 chromosome, complete genomeputative acyl-CoA dehydrogenase1e-113410
NC_017160:396600:3966003966003982431644Yersinia pestis D182038 chromosome, complete genomeputative acyl-CoA dehydrogenase1e-113410
NC_017168:687471:7054237054237070661644Yersinia pestis A1122 chromosome, complete genomeisovaleryl CoA dehydrogenase1e-113410
NC_012791:2233098:2238345223834522400541710Variovorax paradoxus S110 chromosome 1, complete genomeacyl-CoA dehydrogenase domain protein7e-56218
NC_014910:2015627:2036701203670120384071707Alicycliphilus denitrificans BC chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-52207
NC_013922:1855000:1869286186928618711631878Natrialba magadii ATCC 43099 chromosome, complete genomeacyl-CoA dehydrogenase domain protein1e-43177
NC_014831:2201246:2217161221716122188611701Thermaerobacter marianensis DSM 12885 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-32140
NC_015387:2042042:2054804205480420564081605Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein1e-28128
NC_016002:3077648:3093552309355230953361785Pseudogulbenkiania sp. NH8B, complete genomeacyl-CoA dehydrogenase5e-1686.7
NC_014532:1307983:1307983130798313097941812Halomonas elongata DSM 2581, complete genomeacyl-CoA dehydrogenase domain protein1e-1481.6
NC_013947:3347174:3355962335596233571131152Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein1e-1378.6
NC_021150:5019887:5019887501988750210681182Azotobacter vinelandii CA6, complete genomeAcyl-CoA dehydrogenase3e-1377.4
NC_012560:5019900:5019900501990050210811182Azotobacter vinelandii DJ, complete genomeAcyl-CoA dehydrogenase3e-1377.4
NC_014323:245979:2619912619912637811791Herbaspirillum seropedicae SmR1 chromosome, complete genomeacyl-CoA dehydrogenase6e-1376.3
NC_008781:3688965:3688965368896536907611797Polaromonas naphthalenivorans CJ2, complete genomeacyl-CoA dehydrogenase domain protein6e-1376.3
NC_011768:1718869:1721098172109817229061809Desulfatibacillum alkenivorans AK-01, complete genomeacyl-CoA dehydrogenase domain protein8e-1375.9
NC_010501:3671517:3695552369555236973361785Pseudomonas putida W619, complete genomeacyl-CoA dehydrogenase domain protein2e-1274.3
NC_015422:4508028:4533148453314845349411794Alicycliphilus denitrificans K601 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein3e-1273.9
NC_013446:4723380:4723911472391147257071797Comamonas testosteroni CNB-2, complete genomeacyl-CoA dehydrogenase-like protein6e-1272.8
NC_013510:4960500:4963144496314449644001257Thermomonospora curvata DSM 43183, complete genomeacyl-CoA dehydrogenase domain protein7e-1272.8
NC_016622:82418:8241882418842381821Azospirillum lipoferum 4B, complete genomeputative acyl-CoA dehydrogenase7e-1272.4
NC_008314:1465643:1476584147658414781491566Ralstonia eutropha H16 chromosome 2, complete sequenceAcyl-CoA dehydrogenase7e-1272.4
NC_014165:2081914:2084494208449420856541161Thermobispora bispora DSM 43833 chromosome, complete genomebutyryl-CoA dehydrogenase1e-1171.6
NC_015172:1120000:1128563112856311297171155Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeButyryl-CoA dehydrogenase2e-1171.2
NC_002678:5714000:5735093573509357368441752Mesorhizobium loti MAFF303099, complete genomeprobable acyl-CoA dehydrogenase2e-1171.2
NC_011146:4070000:4090803409080340919451143Geobacter bemidjiensis Bem, complete genomeacyl-CoA dehydrogenase domain protein2e-1170.9
NC_009921:3551036:3552596355259635544551860Frankia sp. EAN1pec, complete genomeacyl-CoA dehydrogenase domain protein3e-1170.9
NC_017059:3355006:3367512336751233692961785Rhodospirillum photometricum DSM 122, complete genomeAcyl-CoA dehydrogenase5e-1170.1
NC_006347:3843228:3857391385739138590941704Bacteroides fragilis YCH46, complete genomeacyl-CoA dehydrogenase4e-1170.1
NC_003228:3752035:3764098376409837658011704Bacteroides fragilis NCTC 9343, complete genomeputative acyl-CoA dehydrogenase4e-1170.1
NC_016776:3798108:3810169381016938118721704Bacteroides fragilis 638R, complete genomeputative acyl-CoA dehydrogenase4e-1170.1
NC_008313:886248:8890668890668908501785Ralstonia eutropha H16 chromosome 1, complete sequenceAcyl-CoA dehydrogenase6e-1169.7
NC_011772:2166000:2176025217602521777341710Bacillus cereus G9842, complete genomeacyl-CoA dehydrogenase5e-1169.7
NC_014259:3984568:4006830400683040079571128Acinetobacter sp. DR1 chromosome, complete genomeAcyl-CoA dehydrogenase5e-1169.7
NC_011144:2674242:2677498267749826786221125Phenylobacterium zucineum HLK1, complete genomeacyl-CoA dehydrogenase5e-1169.7
NC_011725:2206000:2216459221645922181681710Bacillus cereus B4264 chromosome, complete genomeacyl-CoA dehydrogenase5e-1169.7
NC_014171:2177353:2188603218860321903121710Bacillus thuringiensis BMB171 chromosome, complete genomeacyl-CoA dehydrogenase5e-1169.7
NC_015593:158107:1927621927621939281167Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeLong-chain-acyl-CoA dehydrogenase8e-1169.3
NC_005957:2196000:2205752220575222074611710Bacillus thuringiensis serovar konkukian str. 97-27, completeacyl-CoA dehydrogenase8e-1169.3
NC_014335:2151404:2162389216238921640981710Bacillus cereus biovar anthracis str. CI chromosome, completeacyl-CoA dehydrogenase7e-1169.3
NC_003911:4001094:4018439401843940202051767Silicibacter pomeroyi DSS-3, complete genomeacyl-CoA dehydrogenase family protein7e-1169.3
NC_012472:2240000:2249869224986922515781710Bacillus cereus 03BB102, complete genomeacyl-CoA dehydrogenase9e-1168.9
NC_009699:3581376:3587796358779635889291134Clostridium botulinum F str. Langeland chromosome, complete genomeacyl-CoA dehydrogenase1e-1068.9
NC_008025:430487:4389264389264400681143Deinococcus geothermalis DSM 11300, complete genomeacyl-CoA dehydrogenase-like protein1e-1068.6
NC_011658:2275864:2285542228554222872511710Bacillus cereus AH187 chromosome, complete genomeacyl-CoA dehydrogenase1e-1068.6
NC_010516:2374000:2382579238257923837121134Clostridium botulinum B1 str. Okra, complete genomeacyl-CoA dehydrogenase family protein1e-1068.6
NC_012563:3729817:3736220373622037373531134Clostridium botulinum A2 str. Kyoto, complete genomeacyl-CoA dehydrogenase family protein2e-1067.8
NC_010516:3545017:3555072355507235562051134Clostridium botulinum B1 str. Okra, complete genomeacyl-CoA dehydrogenase family protein2e-1067.8
NC_009697:3463736:3470152347015234712851134Clostridium botulinum A str. ATCC 19397 chromosome, completeacyl-CoA dehydrogenase2e-1067.8
NC_009698:3359766:3367260336726033683931134Clostridium botulinum A str. Hall chromosome, complete genomeacyl-CoA dehydrogenase2e-1067.8
NC_015733:2658337:2701022270102227022001179Pseudomonas putida S16 chromosome, complete genomeacyl-CoA dehydrogenase2e-1067.4
NC_011773:2239753:2250051225005122517601710Bacillus cereus AH820 chromosome, complete genomeacyl-CoA dehydrogenase3e-1067.4
NC_009698:2265475:2274766227476622758991134Clostridium botulinum A str. Hall chromosome, complete genomeacyl-CoA dehydrogenase3e-1067.4
NC_009697:2265409:2274700227470022758331134Clostridium botulinum A str. ATCC 19397 chromosome, completeacyl-CoA dehydrogenase3e-1067.4
NC_012563:2466000:2474690247469024758231134Clostridium botulinum A2 str. Kyoto, complete genomeacyl-CoA dehydrogenase family protein3e-1067
NC_011146:4070000:4089619408961940907611143Geobacter bemidjiensis Bem, complete genomeacyl-CoA dehydrogenase domain protein3e-1067
NC_018681:867230:8946118946118957531143Nocardia brasiliensis ATCC 700358 chromosome, complete genomeacyl-CoA dehydrogenase5e-1066.6
NC_012658:2393427:2402332240233224034651134Clostridium botulinum Ba4 str. 657 chromosome, complete genomeacyl-CoA dehydrogenase family protein5e-1066.6
NC_018581:3646489:3667062366706236689271866Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase6e-1066.2
NC_003997:2175843:2186097218609721878061710Bacillus anthracis str. Ames, complete genomeacyl-CoA dehydrogenase8e-1065.9
NC_007530:2175967:2186221218622121879301710Bacillus anthracis str. 'Ames Ancestor', complete genomeacyl-coa dehydrogenase8e-1065.9
NC_005945:2175871:2186203218620321879121710Bacillus anthracis str. Sterne, complete genomeacyl-CoA dehydrogenase8e-1065.9
NC_012659:2175867:2186121218612121878301710Bacillus anthracis str. A0248, complete genomeacyl-CoA dehydrogenase8e-1065.9
NC_014761:1715377:1736312173631217374661155Oceanithermus profundus DSM 14977 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein8e-1065.9
NC_003366:128783:1337241337241348601137Clostridium perfringens str. 13, complete genomeacyl-CoA dehydrogenase7e-1065.9
NC_015948:1636491:1640297164029716414541158Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeacyl-CoA dehydrogenase7e-1065.9
NC_015737:2691246:2737395273739527385401146Clostridium sp. SY8519, complete genomeacyl-CoA dehydrogenase1e-0965.5
NC_016111:986936:99923999923910003901152Streptomyces cattleya NRRL 8057, complete genomeacyl-CoA dehydrogenase1e-0965.5
NC_002570:3911153:3920154392015439212931140Bacillus halodurans C-125, complete genomeacyl-CoA dehydrogenase1e-0965.1
NC_014220:481923:4869894869894888091821Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeacyl-CoA dehydrogenase domain protein1e-0965.1
NC_009617:3360990:3365306336530633664451140Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-0964.3
NC_008435:1215437:1215437121543712172181782Rhodopseudomonas palustris BisA53, complete genomeacyl-CoA dehydrogenase domain protein3e-0963.9
NC_007503:1534162:1549377154937715505191143Carboxydothermus hydrogenoformans Z-2901, complete genomeacyl-CoA dehydrogenase3e-0963.9
NC_010170:3944228:3989483398948339913001818Bordetella petrii, complete genomeprobable acyl-CoA dehydrogenase3e-0963.9
NC_014933:3715467:3727671372767137293771707Bacteroides helcogenes P 36-108 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein3e-0963.9
NC_008554:4781500:4788565478856547897671203Syntrophobacter fumaroxidans MPOB, complete genomeacyl-CoA dehydrogenase domain protein4e-0963.5
NC_015434:3507059:3507059350705935082011143Verrucosispora maris AB-18-032 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein4e-0963.5
NC_013743:505842:5298695298695310081140Haloterrigena turkmenica DSM 5511, complete genomeacyl-CoA dehydrogenase domain protein6e-0963.2
NC_007802:1093785:1103262110326211044221161Jannaschia sp. CCS1, complete genomeIsovaleryl-CoA dehydrogenase6e-0963.2
NC_008313:2142397:2142397214239721435781182Ralstonia eutropha H16 chromosome 1, complete sequenceIsovaleryl-CoA dehydrogenase5e-0963.2
NC_010723:1379256:1391554139155413926931140Clostridium botulinum E3 str. Alaska E43, complete genomeacyl-coa dehydrogenase, short-chain specific5e-0963.2
NC_007645:1698803:1698803169880317006021800Hahella chejuensis KCTC 2396, complete genomeAcyl-CoA dehydrogenase5e-0963.2
NC_018581:1718023:1751370175137017525391170Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase1e-0861.6
NC_016582:10227196:1027183110271831102729971167Streptomyces bingchenggensis BCW-1 chromosome, complete genomeacyl-CoA dehydrogenase2e-0861.2
NC_008786:2809985:2832518283251828336841167Verminephrobacter eiseniae EF01-2, complete genomeIsovaleryl-CoA dehydrogenase2e-0861.2
NC_021171:4674086:4682509468250946836451137Bacillus sp. 1NLA3E, complete genomeacyl-CoA dehydrogenase3e-0860.5
NC_008148:2498000:2499897249989725010841188Rubrobacter xylanophilus DSM 9941, complete genomeacyl-CoA dehydrogenase-like protein5e-0860.1
NC_009921:2605721:2621051262105126222141164Frankia sp. EAN1pec, complete genomeacyl-CoA dehydrogenase domain protein5e-0860.1
NC_010501:3671517:3689697368969736908421146Pseudomonas putida W619, complete genomeacyl-CoA dehydrogenase domain protein6e-0859.7
NC_010382:1020516:1028612102861210297481137Lysinibacillus sphaericus C3-41, complete genomeAcyl-CoA dehydrogenase8e-0859.3
NC_015064:2494000:2506463250646325082891827Acidobacterium sp. MP5ACTX9 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein8e-0859.3
NC_003364:1463317:1476652147665214777881137Pyrobaculum aerophilum str. IM2, complete genomeacyl-CoA dehydrogenase8e-0859.3
NC_009921:3455783:3461035346103534622041170Frankia sp. EAN1pec, complete genomeacyl-CoA dehydrogenase domain protein8e-0858.9
NC_011768:79297:8177981779829421164Desulfatibacillum alkenivorans AK-01, complete genomeacyl-CoA dehydrogenase domain protein1e-0758.5
NC_015638:2045500:2048079204807920492511173Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeIsovaleryl-CoA dehydrogenase1e-0758.5
NC_015638:1885041:1899456189945619005981143Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeButyryl-CoA dehydrogenase1e-0758.5
NC_019974:1184871:1269548126954812706991152Natronococcus occultus SP4, complete genomeacyl-CoA dehydrogenase1e-0758.2
NC_015593:158107:1905011905011916341134Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeButyryl-CoA dehydrogenase2e-0758.2
NC_007958:396439:4202594202594214371179Rhodopseudomonas palustris BisB5, complete genomeIsovaleryl-CoA dehydrogenase2e-0757.8
NC_014323:992978:1010347101034710114951149Herbaspirillum seropedicae SmR1 chromosome, complete genomeacyl-CoA dehydrogenase2e-0757.8
NC_016002:3077648:3099302309930231004711170Pseudogulbenkiania sp. NH8B, complete genomeisovaleryl-CoA dehydrogenase2e-0757.8
NC_008268:361424:3753043753043764941191Rhodococcus sp. RHA1, complete genomeacyl-CoA dehydrogenase3e-0757.4
NC_017179:1133510:1137839113783911389751137Clostridium difficile BI1, complete genomebutyryl-CoA dehydrogenase3e-0757.4
NC_013315:1123733:1128062112806211291981137Clostridium difficile CD196 chromosome, complete genomebutyryl-CoA dehydrogenase3e-0757.4
NC_007974:2097334:2103729210372921048861158Ralstonia metallidurans CH34 chromosome 2, complete sequenceacyl-CoA dehydrogenase-like protein3e-0757
NC_014815:6576983:6578960657896065801081149Micromonospora sp. L5 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein4e-0757
NC_020291:2291418:2302413230241323035521140Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacyl-CoA dehydrogenase, short-chain specific5e-0756.6
NC_008596:4043213:4050913405091340520461134Mycobacterium smegmatis str. MC2 155, complete genomeacyl-CoA dehydrogenase5e-0756.6
NC_015167:569569:5919025919025930711170Cellulophaga lytica DSM 7489 chromosome, complete genomeIsovaleryl-CoA dehydrogenase5e-0756.6
NC_016516:2314115:2329757232975723309051149Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeacyl-CoA dehydrogenase7e-0756.2
NC_016511:2321999:2338899233889923400471149Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeacyl-CoA dehydrogenase7e-0756.2
NC_006085:2384892:2400537240053724016851149Propionibacterium acnes KPA171202, complete genomeacyl-CoA dehydrogenase7e-0756.2
NC_014039:2320307:2335967233596723371151149Propionibacterium acnes SK137 chromosome, complete genomeacyl-CoA dehydrogenase, C-terminal domain protein7e-0755.8
NC_014831:866614:8825448825448837041161Thermaerobacter marianensis DSM 12885 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein8e-0755.8
NC_018581:1718023:1748155174815517493121158Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase1e-0655.5
NC_016512:2322598:2338241233824123393891149Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeacyl-CoA dehydrogenase1e-0655.5
NC_007503:1534162:1554529155452915556891161Carboxydothermus hydrogenoformans Z-2901, complete genomeacyl-CoA dehydrogenase, short-chain specific9e-0755.5
NC_009617:385000:3882863882863894251140Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein1e-0655.1
NC_008726:925895:9339499339499350911143Mycobacterium vanbaalenii PYR-1, complete genomeacyl-CoA dehydrogenase domain protein2e-0654.7
NC_009617:2355662:2364854236485423659931140Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-0654.7
NC_017179:446564:4558534558534569861134Clostridium difficile BI1, complete genomeacyl-CoA dehydrogenase family protein4e-0653.5
NC_013315:435599:4462904462904474231134Clostridium difficile CD196 chromosome, complete genomeacyl-CoA dehydrogenase4e-0653.5
NC_016791:2983349:3005928300592830070671140Clostridium sp. BNL1100 chromosome, complete genomeacyl-CoA dehydrogenase4e-0653.5