Pre_GI: BLASTP Hits

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Query: NC_017319:155958:171862 Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence

Start: 171862, End: 172047, Length: 186

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010660:33109:469464694647164219Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence4e-28123
NC_014121:677799:685988685988686383396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase9e-26115
NC_014121:2090630:209890420989042099299396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-26115
NC_014121:5000069:500077350007735001168396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase9e-26115
NC_014121:1682638:171577017157701716165396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase9e-26115
NC_014121:4299500:431649143164914316886396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase9e-26115
NC_014121:2330451:234332723433272343722396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-26115
NC_014121:3553809:356262935626293563024396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-26115
NC_014107:171170:191189191189191584396Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,IS2 transposase orfA9e-26115
NC_014121:489500:514523514523514918396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-26115
NC_009649:16907:300763007630471396Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein1e-25114
NC_009649:94871:948719487195266396Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein1e-25114
NC_009649:94871:103106103106103501396Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein1e-25114
NC_011083:4547825:460386946038694604237369Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase4e-2199.8
NC_014839:253961:3026573026573038461190Pantoea sp. At-9b plasmid pPAT9B02, complete sequence3e-1167.4
NC_011601:756885:769506769506769720215Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome2e-1064.7
NC_008258:3224721:324594132459413246306366Shigella flexneri 5 str. 8401, complete genomeIS2 ORF13e-1063.9
NC_012759:3063285:307135730713573071722366Escherichia coli BW2952 chromosome, complete genomeinsertion sequence 2 OrfA protein3e-1063.9
NC_012759:2862807:288240528824052882770366Escherichia coli BW2952 chromosome, complete genomeinsertion sequence 2 OrfA protein3e-1063.9
NC_007613:4119771:413386541338654134230366Shigella boydii Sb227, complete genomeIS2 ORF13e-1063.9
NC_008258:2542863:255648125564812556846366Shigella flexneri 5 str. 8401, complete genomeIS2 ORF13e-1063.9
NC_007384:3741708:376003237600323760397366Shigella sonnei Ss046, complete genomeIS2 ORF13e-1063.9
NC_007384:2933625:293993329399332940298366Shigella sonnei Ss046, complete genomeIS2 ORF13e-1063.9
NC_007606:1209132:121672712167271217092366Shigella dysenteriae Sd197, complete genomeIS2 ORF13e-1063.9
NC_009790:42112:417894178942154366Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS2, transposase orfA3e-1063.9
AC_000091:1083798:110649611064961106861366Escherichia coli W3110 DNA, complete genomeIS2 element protein3e-1063.9
NC_007384:3151344:316597131659713166336366Shigella sonnei Ss046, complete genomeIS2 ORF13e-1063.9
NC_007384:3741708:375466937546693755034366Shigella sonnei Ss046, complete genomeIS2 ORF13e-1063.9
NC_009788:16360:288402884029205366Escherichia coli E24377A plasmid pETEC_73, complete sequenceIS2, transposase orfA3e-1063.9
NC_008258:1934479:195505819550581955423366Shigella flexneri 5 str. 8401, complete genomeIS2 ORF13e-1063.9
NC_012759:4433500:443503044350304435395366Escherichia coli BW2952 chromosome, complete genomeinsertion sequence 2 OrfA protein3e-1063.9
NC_013361:5319497:532925553292555329620366Escherichia coli O26:H11 str. 11368 chromosome, complete genomeinsertion sequence 2 OrfA protein3e-1063.9
NC_016822:1431200:145416914541691454534366Shigella sonnei 53G, complete genomeIS2 repressor TnpA3e-1063.9
NC_011353:1513000:152804115280411528202162Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-1063.9
NC_002655:1655944:167108916710891671250162Escherichia coli O157:H7 EDL933, complete genomeputative IS encoded protein3e-1063.9
NC_002695:1571389:158711315871131587274162Escherichia coli O157:H7 str. Sakai, complete genomeputative transposase3e-1063.9
NC_011745:3405520:341400934140093414344336Escherichia coli ED1a chromosome, complete genome3e-1063.9
NC_008563:4707826:471945247194524719787336Escherichia coli APEC O1, complete genometransposase InsC for insertion element IS2A/D/F/H/I/K3e-1063.9
NC_004431:4319152:432903443290344329369336Escherichia coli CFT073, complete genomeTransposase insC for insertion element IS2A/D/F/H/I/K3e-1063.9
NC_013364:2672837:269553326955332695898366Escherichia coli O111:H- str. 11128, complete genomeputative IS2 repressor protein InsA3e-1063.9
NC_017328:3088907:311932431193243119689366Shigella flexneri 2002017 chromosome, complete genomeIS2 ORF13e-1063.9
NC_016822:1431200:146961514696151469980366Shigella sonnei 53G, complete genomeIS2 repressor TnpA3e-1063.9
NC_016822:3065426:307123730712373071602366Shigella sonnei 53G, complete genomeIS2 repressor TnpA3e-1063.9
NC_016822:3282654:329986332998633300228366Shigella sonnei 53G, complete genomeIS2 repressor TnpA3e-1063.9
NC_016822:3946500:395422239542223954587366Shigella sonnei 53G, complete genomeIS2 repressor TnpA3e-1063.9
NC_017319:155958:172246172246172611366Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinsertion element IS2 repressor InsA3e-1063.9
NC_017319:192482:218309218309218674366Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinsertion element IS2 repressor InsA3e-1063.9
NC_004337:3590323:360478136047813605191411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_010498:1659328:166385016638501664260411Escherichia coli SMS-3-5, complete genomeIS2 transposase orfA4e-1063.5
AC_000091:2976293:299589129958912996301411Escherichia coli W3110 DNA, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_010473:4596500:459805845980584598468411Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; IS2 insertion element repressor InsA4e-1063.5
NC_010473:3069529:308912730891273089537411Escherichia coli str. K-12 substr. DH10B, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_010473:3273882:328190932819093282319411Escherichia coli str. K-12 substr. DH10B, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_004337:2747917:277055127705512770961411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_000913:4494773:449625044962504496660411Escherichia coli K12, complete genomeKpLE2 phage-like element; IS2 insertion element repressor InsA4e-1063.5
NC_010498:1210145:121338512133851213795411Escherichia coli SMS-3-5, complete genomeIS2 transposase orfA4e-1063.5
NC_004337:3049118:307957030795703079980411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004741:3041294:307041130704113070821411Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004337:3590323:381541938154193815829411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004337:3590323:383131238313123831722411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_000913:3176000:318416431841643184574411Escherichia coli K12, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_010498:1094000:110194511019451102355411Escherichia coli SMS-3-5, complete genomeIS2 transposase orfA4e-1063.5
NC_004431:3409389:345226434522643452638375Escherichia coli CFT073, complete genomeTransposase insC for insertion element IS2A/D/F/H/I/K3e-1063.5
NC_011751:3453683:347391534739153474289375Escherichia coli UMN026 chromosome, complete genomeIS2 insertion element repressor InsA; KpLE2 phage-like element3e-1063.5
NC_017328:3935185:394041639404163940826411Shigella flexneri 2002017 chromosome, complete genomeIS2 orfA4e-1063.5
NC_004337:2035945:203594520359452036355411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004337:3590323:391475739147573915167411Shigella flexneri 2a str. 301, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004851:157675:171135171135171545411Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceinsertion sequence 2 OrfA protein4e-1063.5
NC_004741:4160500:416881241688124169222411Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_004741:2009769:201261820126182013028411Shigella flexneri 2a str. 2457T, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
AC_000091:4501430:450290745029074503317411Escherichia coli W3110 DNA, complete genomeIS2 insertion element repressor InsA4e-1063.5
AC_000091:3180275:318479831847983185208411Escherichia coli W3110 DNA, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_011750:1849561:186742018674201867830411Escherichia coli IAI39 chromosome, complete genomeinsertion sequence 2 OrfA protein4e-1063.5
NC_007941:11319:405034050340913411Escherichia coli UTI89 plasmid pUTI89, complete sequenceIS2 OrfA4e-1063.5
NC_000913:2975659:299525729952572995667411Escherichia coli K12, complete genomeIS2 insertion element repressor InsA4e-1063.5
NC_008258:3550500:356523735652373565602366Shigella flexneri 5 str. 8401, complete genomeIS2 ORF16e-1062.8
NC_007613:1353500:135903313590331359398366Shigella boydii Sb227, complete genomeIS2 ORF17e-1062.8
NC_009837:127000:127112127112127522411Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceinsertion sequence 2 OrfA protein1e-0962
NC_009837:92000:107550107550107960411Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceinsertion sequence 2 OrfA protein1e-0962
NC_006625:63342:672026720267567366Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceinsertion sequence 2 OrfA protein1e-0962
NC_014562:469154:475073475073475705633Pantoea vagans C9-1 chromosome, complete genomeTyrosine recombinase xerD1e-0961.6
NC_010498:3291344:329941632994163299715300Escherichia coli SMS-3-5, complete genome2e-0961.2
NC_007973:2773427:278083427808342781235402Ralstonia metallidurans CH34 chromosome 1, complete sequencetransposase IS3/IS9113e-0960.5
NC_007973:2150962:216442321644232164824402Ralstonia metallidurans CH34 chromosome 1, complete sequencetransposase IS3/IS9113e-0960.5
CU928159:30700:336913369133933243Escherichia coli str. 55989 plasmid 55989p, complete genomeputative transposase ORF A (fragment), IS23e-0960.5
NC_003047:3360000:341062234106223411014393Sinorhizobium meliloti 1021, complete genomeTRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM17e-0959.3
NC_014307:1131241:114283311428331143228396Ralstonia solanacearum CFBP2957 chromosome, complete genometransposase (orfa protein )2e-0858.2
NC_014311:1545175:155820715582071558596390Ralstonia solanacearum PSI07 chromosome, complete genometransposase (ORFA protein )5e-0856.6
NC_014311:2606434:261257926125792612968390Ralstonia solanacearum PSI07 chromosome, complete genometransposase (ORFA protein )5e-0856.6
NC_014310:279912:286062286062286451390Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransposase5e-0856.6
NC_020209:1949500:196784319678431968235393Pseudomonas poae RE*1-1-14, complete genomeputative transposase4e-0856.6
NC_020209:4943734:496661549666154967007393Pseudomonas poae RE*1-1-14, complete genomeputative transposase4e-0856.6
NC_020209:4943734:496484449648444965236393Pseudomonas poae RE*1-1-14, complete genomeputative transposase4e-0856.6
NC_007794:1504449:152745615274561527806351Novosphingobium aromaticivorans DSM 12444, complete genome4e-0856.6
NC_008253:4817864:482475648247564824935180Escherichia coli 536, complete genomeputative transposase6e-0856.2
NC_003305:1743939:174877717487771749166390Agrobacterium tumefaciens str. C58 chromosome linear, completeIS426 transposase5e-0856.2
NC_016002:1048420:105494610549461055332387Pseudogulbenkiania sp. NH8B, complete genometransposase IS3/IS911 family protein8e-0855.8
NC_014664:1614568:161915916191591619572414Rhodomicrobium vannielii ATCC 17100 chromosome, complete genometransposase IS3/IS911 family protein2e-0754.7
NC_014664:2669562:267158626715862671999414Rhodomicrobium vannielii ATCC 17100 chromosome, complete genometransposase IS3/IS911 family protein2e-0754.7
NC_010508:1980689:199160619916061991971366Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetransposase IS3/IS911 family protein2e-0754.7
NC_012721:1986436:199367719936771994042366Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase IS3/IS9112e-0754.7
NC_015424:2462522:247931924793192479633315Aeromonas veronii B565 chromosome, complete genomeIS2 transposase3e-0753.9
NC_008740:3520500:352477035247703525147378Marinobacter aquaeolei VT8, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_003296:556836:578373578373578741369Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFA PROTEIN4e-0753.5
NC_014118:1528851:154024615402461540647402Burkholderia sp. CCGE1002 chromosome chromosome 2, completetransposase IS3/IS911 family protein4e-0753.5
NC_014117:132524:163887163887164288402Burkholderia sp. CCGE1002 chromosome chromosome 1, completetransposase IS3/IS911 family protein4e-0753.5
NC_008253:3122148:314755331475533147759207Escherichia coli 536, complete genomehypothetical protein6e-0753.1
NC_012721:1635999:164431916443191644684366Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase5e-0753.1
NC_012724:2547500:257322125732212573586366Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase5e-0753.1
NC_007651:1620000:164870416487041649069366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase5e-0753.1
NC_007650:84140:105871105871106236366Burkholderia thailandensis E264 chromosome II, complete sequencetransposase5e-0753.1
NC_007651:1726472:173842317384231738788366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase5e-0753.1
NC_007650:420745:440579440579440944366Burkholderia thailandensis E264 chromosome II, complete sequencetransposase5e-0753.1
NC_007651:3064530:315599031559903156355366Burkholderia thailandensis E264 chromosome I, complete sequencetransposase5e-0753.1
NC_003296:673790:707962707962708330369Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO10-TRANSPOSASE ORFA PROTEIN7e-0752.8
NC_016812:258500:290263290263290697435Sinorhizobium fredii HH103, complete genome7e-0752.8
NC_015136:1101725:112602711260271126422396Burkholderia sp. CCGE1001 chromosome 1, complete sequencetransposase IS3/IS911 family protein1e-0652.4
NC_007951:769500:789737789737790144408Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase9e-0752.4
NC_014311:3076519:310981731098173110182366Ralstonia solanacearum PSI07 chromosome, complete genometransposase1e-0652
NC_014311:1635408:165416616541661654531366Ralstonia solanacearum PSI07 chromosome, complete genometransposase1e-0652
NC_015381:1318818:133375213337521334147396Burkholderia gladioli BSR3 chromosome 1, complete sequencePutative transposase2e-0651.6
NC_010515:2691000:270750927075092707910402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-0651.6
NC_010515:2111691:212698321269832127384402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-0651.6
NC_010515:2111691:217327521732752173676402Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-0651.6
NC_007651:2166000:217506121750612175462402Burkholderia thailandensis E264 chromosome I, complete sequencetransposase2e-0651.6
NC_010511:7024412:704697670469767047395420Methylobacterium sp. 4-46 chromosome, complete genometransposase IS3/IS911 family protein1e-0651.6
NC_008543:127675:147175147175147576402Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS3/IS911 family protein2e-0651.2
NC_008061:2106848:212219421221942122595402Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS3/IS9112e-0651.2
NC_015593:1587684:159437815943781594785408Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completetransposase IS3/IS911 family protein3e-0650.8
NC_007434:2386036:240400224040022404466465Burkholderia pseudomallei 1710b chromosome I, complete sequencetransposase7e-0649.3